Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00289 ATGCATTGCGTTGTTTTCGAAGAGGTGTATACTGATCTCACTTTCTCTCAGCTTGAAGAATCAACCAGTGTTTGCCCCCATTTATTTTGTGGTAAAAGCACCACTTTAGGCTTTCTGATTGGCATGGCTGATTTTCTGACCTCTACCCACCGAGCCAAGTGGATCTTCTCTCCTCAACAACTGGTTGAGAAATATACAGCTGCTAATCAGAGAGCCAAACAAATCCTAGAGAAGGGTGGAGTAACTCTAATGGAAGTAGATGTTGACGGGTCTTTGTCATATCCTGAACCCCAGACGACTGCAAGCGATAATGCTGAAAAGCATTCTCAGATAAAACCTGTTAGTATTGAAGAAGAACAATGTATAAAGGTTTTTTATGAAAACAAGCTACAAGAAGTGTGTAACAATTTGCATTTCCCTCATAAGATCCAGGCAACAGCGCTCATCTTTTTTAAAAGGTTCTATCTGCGATGGTCGGTGATGGAACATCAACCAAACAATCTAATGTTGACCTGCATATATGCTGCTTGTAAAATAGAAGAAAATCTTGTATCGGCTGAGGAGCTCGGTAAGAGGGTTTCCCAGGATCATGAAATAGTTCTCTGTAATGAGATGATAGTTTATCAGGCACGGATAGGTCACAGATATCAAATTGATCTAAGCCTGGAATTTGAGCTTATTGTTTATACTCCATATCGCTCAGTTGAAGGTTTTAATTATATGGAGGTTCGTCTAGTTGGCTGTATGGAACTCTTTTTAAATGCTTTGCAAAATACAGCAAGACTGGAAGTTGATAAAATGATGCTTACAGATGCACCACTCTTATTTCCTCCTGGACAGTTGGCCTTGGCCGCCCTGCGTAACTCAAATGCACTCCATCAAGTTGTTGACTTCGATAGTTTTCTGAGCAGAGTTTTTTCACATCAGAATTCCACGCATACGATGGCCGAGCTTCTTGAATCATTGGATGCAATTGATTCTTTGGTTAGGAAATACAGAAGTCCTTCAGAGAAGGAATTGGAGCATATCAACGGGAAACTGAAGTCTTGTTGGGAGGGGAGAAATCAAATCACAAGTCCAGAAAGAGCTCTAGTTTTATATTCCTTTCAATTGAGCAAGCTTACAAGTGAGTCTGATTTTGGGAAGTTTGCTGCTCTGCGTATGTCTCTTGATTGCCTTTGGTTCGGATTCAAAGCTGTAGTTGTGTTCTGTGCAAATTTGCCGAGGACTGGACTATCAACATTTAAGTGA 1251 0.4069 MHCVVFEEVYTDLTFSQLEESTSVCPHLFCGKSTTLGFLIGMADFLTSTHRAKWIFSPQQLVEKYTAANQRAKQILEKGGVTLMEVDVDGSLSYPEPQTTASDNAEKHSQIKPVSIEEEQCIKVFYENKLQEVCNNLHFPHKIQATALIFFKRFYLRWSVMEHQPNNLMLTCIYAACKIEENLVSAEELGKRVSQDHEIVLCNEMIVYQARIGHRYQIDLSLEFELIVYTPYRSVEGFNYMEVRLVGCMELFLNALQNTARLEVDKMMLTDAPLLFPPGQLALAALRNSNALHQVVDFDSFLSRVFSHQNSTHTMAELLESLDAIDSLVRKYRSPSEKELEHINGKLKSCWEGRNQITSPERALVLYSFQLSKLTSESDFGKFAALRMSLDCLWFGFKAVVVFCANLPRTGLSTFK 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00289 416 SMART cyclin_7 128 209 IPR013763 -
Car07g00289 416 Pfam Cyclin C-terminal domain 231 328 IPR031658 -
Car07g00289 416 CDD CYCLIN 130 207 IPR013763 -
Car07g00289 416 SUPERFAMILY Cyclin-like 107 209 IPR036915 -
Car07g00289 416 PANTHER CYCLIN-H 42 361 - -
Car07g00289 416 Gene3D - 104 229 - -
Car07g00289 416 SUPERFAMILY Cyclin-like 231 352 IPR036915 -
Car07g00289 416 Gene3D - 230 331 - -
Car07g00289 416 PANTHER CYCLIN 42 361 IPR043198 GO:0006357|GO:0016538
Car07g00289 416 Pfam Cyclin, N-terminal domain 130 188 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00289 Car-Chr7 2622087 2626757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00289 42 329 Core Cell Cycle Gene Families AT5G27620 56.040 1.18e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00289 K06634 - gmx:547736 465.307