Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00283 ATGTCAAAGTTTCAGAAGAGTTACTATGATGTCGTGGGTTTGTGCTGTTCTTCGGAGGTTCCACTAATTGAAAACATCCTCAAACCTCTTCAAGGAATCAAAGAGGTTTCCGTCATCGTACCGTCACGAACCGTTATCGTTGTTCACGACAGTCTTGTCATTTCGCAACTTCAAATTGTTAAGGCACTGAATCAAGCAAGATTAGAGGCGAATATTAGAGTGTATGGTGACGAAAAGCACGAAAAAAGATGGCCAAGTCCTTACTCAGTTGCTTCGGGTTTGCTACTTTTGCTTTCGTTTCTCAAATTTGTGTATCTTCCTTTGAAATTTCTTGCCCTTGGAGCTGTTGCCGCCGGTGCCTTTCCGATCATCTTGAAAGCTATTGTTTCCATTCGGAACGTTAGATTTGACATCAACATTCTTGTCATCATAGCAGTTATTGGGACAATTGCTATGGAGGATTATTTGGAAGCCGGCACCATTGTTTTTCTGTACTCAATTGCAGAATGGCTAGAGTCAAGGGCCAGCCACAAGGCAAATGCAGTGATGTCATCGTTGATGAACATGACTCCTCAAAAAGCAGTGATAGCTGAAACAGGAGAGGTTGTGGATGCTGATGAGGTGAAAATAAACACAATTTTGGCAGTTAAAGCAGGGGAGGTGATACCCATTGATGGAGTTGTTTTAGATGGTAACTGTGAAATTGATGAAAAAACATTGACAGGGGAATCATACCCTGTAGCCAAACAAAAAGATTCTACTGTATGGGCTGGGACAATCAATTTAAATGGTTATATCAGTGTGAAGACTACTGCATTAGCTGAAGACTGTGTGGTGGCTAAAATGGCAAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACCAGTACTCAAAGGTTGATCGACAAGTTTGCAGTGTTTTATACCCCAGCTGTTGTAGTCATATCAACTTTTGTAGCGGTGATTCCACTTCTGTTAAAATTACACAACGAGAAATATTGGCTTCACTTTGCACTGGTTGTTTTAGTAAGTGCATGTCCATGTGCACTTATCCTTTCAACACCAGTTGCAACCTTTTGTGCTTATACCAAAGCAGCTACATCTGGCCTTCTCATCAAAGGGGGTCATTCTCTTGAAACACTGGCAAAAATTAAGGTCATGGCTTTTGACAAAACGGGTACCATAACCAAGGGTGAATTTGTGGTGACAAATTTTCAATCTCTTTCAGATGACATTGATTTGAACACATTGCTCTACTGGGTGTCAAGTATTGAGAGCAAGTCAAGCCATCCATTGGCAGAAGCAATAGTTGATCATGGAAGGTCTCTCTCCATTAAACCAAATCCAGAAAAGGTGACAGAATTTGAAAAttttcctggagaaggaatctgtggaaaaattgatgaaagagttctttacaTAGGAAACAAAAAAATTGCCAGAAGAGCAGGGTCTGAGACAGAAGTTCCAACATTACAAGGTGAAGTTCATGAAGGGAAAACCACCGGTTACATATATTTAGGACCAACCCCTGTTGGAATTTTCTCTTTATCTGATGTTTGTCGATCAGGGGTCCAGGAGGCAATAAGACAGTTAAAGTTGTTGGGAATCAAAACTGCTATGCTCACTGGAGATTGTCAGTCAGCTGCAGTGCAAGCACAGGAACAGCTAGGTCATGCCCTGGAATCAGTCCATGCAGAACTTTTGCCAGAGGACAAAGTAAAAATCATCTCAGAATTTAAGAAGGAAGGTCCAACAGCCATGCTTGGAGATGGTTTAAATGATGCACCTGCATTAGCTACAGCTGATATCGGAATCTCAATGGGCATTTCAGGTTCTGCACTAGCAAGTGAGACCGGCGATATAATTCTTATGTCAAATGATCTAAGGAAGATACCAGAAGCCATTAAGCTTGCTAGAAAGTCTCAAAGAAAAGTGATAGAAAATATTGTTTTGTCCGTCATTACTAAAGTTGCAATTCTTGGTTTGGCCATTGGTGGTCATCCAATTGTTTGGGCAGCAGTTCTTGCTGATGTTGGAACATGTCTGTTGGTCATCTTAAACAGCATGTTACTTCTGCAAAGAGGACACAAGCATGGAGGAAAAAGTTGTAAATCATCCACTCAACATCATATCCACAAAAATACATGTGGTGACACTAATGGGAGTCCCTCtcatcatcatcatcaacataagcaccagcatcaacatcaacatcatagccataagagttgttgCTCAGACAAGGCTCAGCCCCAGAAGTGTGCCACCAAGTCATGCTCCTCAAAGCACCCACCATGCCTTTCAAATCCAAATGGAAGTATTAACCATCACAAAATCACGGAGAATCACGGTCAATGTAAGGGAAGTGAAGAGTTACATGAATCAGATCACCATCATCATGGAAAATGTGACAAGAATCATAATGGAGTCCAGAAGCATGATATTGAAAGCAAGTGTTGTTCAGAGTCACACAATTTGATTCTAAATACTGAAGATATTGATGCAGCTTTAATAAACAGTCACGGCAATTGTTTGGGACATAAGTCCCACGGGACAAAACACTGCCACAATGAAAATATTAACATGGTTACTCATCATGACAGCACTTCTCTTGGTTCTCCTTCCCATCTCAATCCCTGTGGTAAAAAAGAAAGACATCAATCTGCTAAGCATTGCCACTCAAACCATGGTCATGAAAACCTGAAAGATCACGGAGCCACTCATGTCATTCATCATCAAAAATCAAGTTGTCATTCTGATATTAAGAAGCATGGGACAGGCGAAATATCCATTGACATCATCAacgagcacgagcacgagcacgagcacgagcacgaTGAATCAGCCTCGAAGCACGGTTGTTCAAGTTTAGCAGACAAAGAAAACGATTCCCGTAAAGACTGCTTCAACACATGTTGTAGAAATGAGGAGTTTTCAAAGGAATCCATCGAGTCCTCAATTGTGCATGCTTGTATTAGTTTGGACAAGAGAGAAGTAAATGGATGTTGTAAGAGTTACATGAAGGAATGCTGTAGCAAGCATGGACACTCAGGGGGTGGTAGTTTTGTAGGAGGTTTATCAGAAATCATTACAGAATAG 3099 0.3908 MSKFQKSYYDVVGLCCSSEVPLIENILKPLQGIKEVSVIVPSRTVIVVHDSLVISQLQIVKALNQARLEANIRVYGDEKHEKRWPSPYSVASGLLLLLSFLKFVYLPLKFLALGAVAAGAFPIILKAIVSIRNVRFDINILVIIAVIGTIAMEDYLEAGTIVFLYSIAEWLESRASHKANAVMSSLMNMTPQKAVIAETGEVVDADEVKINTILAVKAGEVIPIDGVVLDGNCEIDEKTLTGESYPVAKQKDSTVWAGTINLNGYISVKTTALAEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAVFYTPAVVVISTFVAVIPLLLKLHNEKYWLHFALVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGHSLETLAKIKVMAFDKTGTITKGEFVVTNFQSLSDDIDLNTLLYWVSSIESKSSHPLAEAIVDHGRSLSIKPNPEKVTEFENFPGEGICGKIDERVLYIGNKKIARRAGSETEVPTLQGEVHEGKTTGYIYLGPTPVGIFSLSDVCRSGVQEAIRQLKLLGIKTAMLTGDCQSAAVQAQEQLGHALESVHAELLPEDKVKIISEFKKEGPTAMLGDGLNDAPALATADIGISMGISGSALASETGDIILMSNDLRKIPEAIKLARKSQRKVIENIVLSVITKVAILGLAIGGHPIVWAAVLADVGTCLLVILNSMLLLQRGHKHGGKSCKSSTQHHIHKNTCGDTNGSPSHHHHQHKHQHQHQHHSHKSCCSDKAQPQKCATKSCSSKHPPCLSNPNGSINHHKITENHGQCKGSEELHESDHHHHGKCDKNHNGVQKHDIESKCCSESHNLILNTEDIDAALINSHGNCLGHKSHGTKHCHNENINMVTHHDSTSLGSPSHLNPCGKKERHQSAKHCHSNHGHENLKDHGATHVIHHQKSSCHSDIKKHGTGEISIDIINEHEHEHEHEHDESASKHGCSSLADKENDSRKDCFNTCCRNEEFSKESIESSIVHACISLDKREVNGCCKSYMKECCSKHGHSGGGSFVGGLSEIITE 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00283 1032 Pfam E1-E2 ATPase 193 365 - -
Car07g00283 1032 Gene3D - 398 520 IPR023299 GO:0000166
Car07g00283 1032 ProSiteProfiles Heavy-metal-associated domain profile. 6 72 IPR006121 GO:0046872
Car07g00283 1032 Gene3D - 176 290 - -
Car07g00283 1032 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 3 931 - -
Car07g00283 1032 Pfam haloacid dehalogenase-like hydrolase 383 602 - -
Car07g00283 1032 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g00283 1032 PRINTS H+-transporting ATPase (proton pump) signature 588 604 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g00283 1032 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g00283 1032 MobiDBLite consensus disorder prediction 939 965 - -
Car07g00283 1032 SUPERFAMILY Calcium ATPase, transduction domain A 201 286 IPR008250 -
Car07g00283 1032 ProSitePatterns E1-E2 ATPases phosphorylation site. 389 395 IPR018303 -
Car07g00283 1032 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 138 691 IPR027256 GO:0006812|GO:0016021|GO:0019829
Car07g00283 1032 SUPERFAMILY HMA, heavy metal-associated domain 2 71 IPR036163 GO:0046872
Car07g00283 1032 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 931 - -
Car07g00283 1032 SUPERFAMILY Calcium ATPase, transmembrane domain M 138 381 IPR023298 -
Car07g00283 1032 SFLD p-type atpase 370 640 IPR044492 -
Car07g00283 1032 SUPERFAMILY HAD-like 386 689 IPR036412 -
Car07g00283 1032 Gene3D - 378 639 IPR023214 -
Car07g00283 1032 MobiDBLite consensus disorder prediction 697 744 - -
Car07g00283 1032 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 161 666 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car07g00283 1032 MobiDBLite consensus disorder prediction 784 808 - -
Car07g00283 1032 MobiDBLite consensus disorder prediction 725 739 - -
Car07g00283 1032 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 138 692 - -
Car07g00283 1032 PRINTS P-type cation-transporting ATPase superfamily signature 236 250 - -
Car07g00283 1032 PRINTS P-type cation-transporting ATPase superfamily signature 387 401 - -
Car07g00283 1032 PRINTS P-type cation-transporting ATPase superfamily signature 534 544 - -
Car07g00283 1032 PRINTS P-type cation-transporting ATPase superfamily signature 588 607 - -
Car07g00283 1032 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Car07g00283 1032 Coils Coil 1030 1032 - -
Car07g00283 1032 SFLD Haloacid Dehalogenase 370 640 - -
Car07g00283 1032 Gene3D - 1 74 - -
Car07g00283 1032 CDD P-type_ATPase_HM 121 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00283 Car-Chr7 2571303 2580062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00283 3 1032 Primary Pumps ATPases AT4G30110 53.346 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00283 K01534 - gmx:100817567 1388.63