Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00279 ATGTCATCATCTTCATCATTAGTAACATTGAAAAGTTGTTACTCGGTGAGACCTATTGAACCAACATGGTGTGGTCGTTTACCATTATCCGAATGGGATCAAATTGGTATCATAACTCATGTGCCAACAATTTACTTCTATCGTCCCTCACAGACTTGGCTTTCCACTACAATTGCAACCACCTTGAAAGATTCCTTAAGCAAAGTCCTTGTGCCGTTTTATCCACTGGCTGGTCGTTTACAATGGAATGACAAAAACAACGGTCGTTTTGACCTCGAATGCAACGCATTGGGTGCTCAATTCATCGAAGCACAATCCTCGTTAACTTTAACCGATATCAGTGACTTTTCACCTTCTTCGGATTATTACCGTTACCTTATCCCGCGCATTGACTACACGCTCCCAATTAACGACATTCCTTTGGTTATCGTTCAACTCACGAGCTTCAAATGCGGTGGCGTTAGCATTAGTTTGTTAGTCTCACACGCGGTTGCTGATGGACAAAGCGCGTTGCATTTCACTTCTGAGTGGGCCAGGCTTGCACGTGGCGAGCCTATTAAAACGATGCCGTTTGTCGATAGAAACGCTTTGCATGTTGGAGAATCACAATCTCCTTTGTTACCACAATGTTCCAATAGTGAACGGGAATTTAATGAACCTCCCTTTTTGTTGGGAAATACCGATAACATTGAAGAAAGGAAGAAAAAAACAACTGTGGCTATTATCAAAGTGAGTAAAACACAAGTTGAGAAGTTGAGAAAAACAGCGAATGAGAGTTGGGGAAAACCTAGTAATGGGCGTGGTTATACACGGTATGAAACGGTAACCGGTCATGTTTGGAGAACTGCAAGTAAAGCTAGAGGGCATGGAAATGACCAACCAACAGCGCTCGGTGTTTGTGTTGATTGGAGGTGCCGTGTGGATCCTAATTTACCAAAAGGGTATTTTGGGAATGCGACTTTAGATGTTGTGGCTACTAGTCTTGCGGGTGATTTGATGAGTAAGCCTTTGGGGTATGCTTCTAGTAGGATAAGGGAAGCGATTGAGAAAGTGAATAATGAGTATGTGAGATTGGGGATGGAGTATTTTAAGAAACATGAGGATTTGACTAAGTTTCAAGATCTTCATGCTATAGGGAGTGACAAGGGACCTTTTTATGGGAACCCTAATTTAGGAGTGGTTAGTTGGTTAACTTTGCCCATTTATGGACTTGATTTTGGGTGGGGGAAAGAGGTATATATGGGGCCAGGAACACATGAACTTGATGGAGATTCGTTGCTTCTTCCTGGTCCTGATAATGATGGATCTTTGTTGGTTGCTATTTGTTTGCAAGAGGCTCATATGGATGCGTTCAAGAGACATTTTCATCAAGATATTGTCTGA 1383 0.4223 MSSSSSLVTLKSCYSVRPIEPTWCGRLPLSEWDQIGIITHVPTIYFYRPSQTWLSTTIATTLKDSLSKVLVPFYPLAGRLQWNDKNNGRFDLECNALGAQFIEAQSSLTLTDISDFSPSSDYYRYLIPRIDYTLPINDIPLVIVQLTSFKCGGVSISLLVSHAVADGQSALHFTSEWARLARGEPIKTMPFVDRNALHVGESQSPLLPQCSNSEREFNEPPFLLGNTDNIEERKKKTTVAIIKVSKTQVEKLRKTANESWGKPSNGRGYTRYETVTGHVWRTASKARGHGNDQPTALGVCVDWRCRVDPNLPKGYFGNATLDVVATSLAGDLMSKPLGYASSRIREAIEKVNNEYVRLGMEYFKKHEDLTKFQDLHAIGSDKGPFYGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHELDGDSLLLPGPDNDGSLLVAICLQEAHMDAFKRHFHQDIV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00279 460 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 10 459 - -
Car07g00279 460 Pfam Transferase family 8 456 - -
Car07g00279 460 Gene3D - 4 217 IPR023213 -
Car07g00279 460 Gene3D - 226 457 IPR023213 -
Car07g00279 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00279 Car-Chr7 2539205 2540884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00279 8 457 Monolignol Biosynthesis Gene Families AT5G48930 37.472 1.69e-104 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00279 K13065 - gmx:100777007 637.491