Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00269 ATGAGGTACATTCCGACAAAAAGCTTAAAGAGGCTATTTTCCTTGAGAAAAAGAGGTTCAAAAGAACATGTTTTGAGTTCAAAAAATAAAGAAAATGATGAGAGCTTCAAGAATCTTCAAAATGAAGAACCTTGTCAGAAACCCACTTGGAAATGTTTCTCTTATGAAGAGTTGTTTGATGCCACCAATGGCTTCACATCAGAAAATATGGTTGGAAAAGGAGGGTATGCTGAAGTTTACAAGGGAACATTGAAAAATGGGGAGGAAATTGCAGTGAAGAGATTAACAAGAACTTCAAGAGATGAAAGAAAGGAGAAAGAGTTTTTAACAGAGATTGGCACAATTGGTCATGTTCACCATTCCAATGTTTTGCCTCTTCTAGGATGTTGTATTGACAATGGACTTTACTTTGTTTTTGAGTTATCTTCAAGAGGTTCTGTTTCATCTATTCTTCATGATGAAAAGTTACCTCCTTTAGATTGGAAAACAAGACATAAAATAGCTATTGGAACTGCACGTGGACTTCATTACTTGCACAAAGGTTGCAAGAGGAGAATAATTCACCGAGATATCAAAGCATCAAACATTTTATTGACAAAAGATTTTGAACCACAGATATCTGATTTTGGATTAGCAAAATGGCTTCCATCTCAATGGACTCATCATTCAATTGCCCCAATAGAAGGGACATTTGGACATTTGGCACCAGAATACTATTTGCATGGAGTAGTGGATGAGAAAACAGATGTATTTGCCTTTGGTGTATTGTTGTTAGAAGTTATTTCTGGCAGGAAACCAGTGGATACTTCTCACCAAAGCTTACATAGTTGGGCTAAACCAATTTTGAACAAGGGTGAAATAGAAGAGCTGGTAGATGTAAGGCTTGAAGGTGCTTATGATGTGACACAGTTAAAAAGACTTGCCTTTGCTGCCTCTCTCTGCATCAGAGCATCTTCCACTTGGAGACCTACCATGACTGAGGTGTTGGAGATAATggaggagggagagatggataaagacaaatggaaaatgccagaggaagaagaagaacaagaagaagaGTTCTGGGGTTTTGAGGATTTAGAATATGAATATGACAGTTCCTTTTCAATGTCTTTAATTGATTCAATTGAAAGTAATTAA 1143 0.3456 MRYIPTKSLKRLFSLRKRGSKEHVLSSKNKENDESFKNLQNEEPCQKPTWKCFSYEELFDATNGFTSENMVGKGGYAEVYKGTLKNGEEIAVKRLTRTSRDERKEKEFLTEIGTIGHVHHSNVLPLLGCCIDNGLYFVFELSSRGSVSSILHDEKLPPLDWKTRHKIAIGTARGLHYLHKGCKRRIIHRDIKASNILLTKDFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYLHGVVDEKTDVFAFGVLLLEVISGRKPVDTSHQSLHSWAKPILNKGEIEELVDVRLEGAYDVTQLKRLAFAASLCIRASSTWRPTMTEVLEIMEEGEMDKDKWKMPEEEEEQEEEFWGFEDLEYEYDSSFSMSLIDSIESN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00269 380 CDD STKc_IRAK 71 334 - -
Car07g00269 380 Gene3D Transferase(Phosphotransferase) domain 1 143 357 - -
Car07g00269 380 SMART serkin_6 65 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00269 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Car07g00269 380 PANTHER OS04G0654600 PROTEIN 28 362 - -
Car07g00269 380 SUPERFAMILY Protein kinase-like (PK-like) 46 332 IPR011009 -
Car07g00269 380 Gene3D Phosphorylase Kinase; domain 1 35 140 - -
Car07g00269 380 PANTHER OS08G0249100 PROTEIN 28 362 - -
Car07g00269 380 Pfam Protein tyrosine and serine/threonine kinase 68 328 IPR001245 GO:0004672|GO:0006468
Car07g00269 380 ProSiteProfiles Protein kinase domain profile. 65 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00269 380 ProSitePatterns Protein kinases ATP-binding region signature. 71 93 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00269 Car-Chr7 2437593 2442832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00269 53 337 Trihelix Transcription Factor Family AT1G70460 44.746 3.32e-74 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Car07g00269 PK_Tyr_Ser-Thr 7.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00269 - - gmx:100305398 657.136