Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00265 ATGTATGCGAGTCAGTTCGACGGCAACGCAGCCTTCTCCGGCGGCGGTTTCATGCCTTCTCAAACCACTCAGGGCAATGACTCTCCCTTCACTCCCTCCAAGAATCGTGATGCTCAGTCCTTGCTTCCTCTGACGATCAAGCAAATTAACGATGCAGTCGATGCTTCTCAGTCAAATGATGATAAAACAAATCTTATTATTGACGGTGTTGATGTCAACAATGTTACTCTTGTTGGTAGGGTTTGCAATAGACTTGGACGGCTTTCTGATATTAATTTTGTACTTGACGATGGTACAGGAACAATTGAGTGCAATAAATGGCTTCAGGATGCTGCAGACCAAAATGAAGCGGAGGGTATCTTGGATGGAATATATGTGCGGCTACATGGACACTTGAAAGGTTTTCAGGGTAAAAAAACCCTAAATATTTTCTCTTTTAGGCCTGTGACTGACTTCAATGAGATTGCCAGCCATTTCATTGATTGCATTTATGTTCATCTATATAATTCCAGATTACGGCAAATCCAGGCTAGTATCCCCAACCAGCAACATGTTCCTAATTCCACACAAATCACTCCCACAAAAGGTTATCAAGCTCAAGCCATGCCACCAAATCAATTCCCTGGTCAGCATAATAATGGTCAGAAGAGTGTTGAAGAAATGGTCATAGAGGTTTTGCATCTTCCCTCAAACAGGGCAAGGGATGAGGGAGTCTCTCGTGATCTTATTGCGCAGCATCTTGGAATTCCTTTCGATAAACTCATGTTGGCTATTAAAAATCTTACAGAAGAAGGTGCAATTTATGAAGCCATAGCTGATCACTATAAGTCAATTGTCGACGGTTGA 846 0.4232 MYASQFDGNAAFSGGGFMPSQTTQGNDSPFTPSKNRDAQSLLPLTIKQINDAVDASQSNDDKTNLIIDGVDVNNVTLVGRVCNRLGRLSDINFVLDDGTGTIECNKWLQDAADQNEAEGILDGIYVRLHGHLKGFQGKKTLNIFSFRPVTDFNEIASHFIDCIYVHLYNSRLRQIQASIPNQQHVPNSTQITPTKGYQAQAMPPNQFPGQHNNGQKSVEEMVIEVLHLPSNRARDEGVSRDLIAQHLGIPFDKLMLAIKNLTEEGAIYEAIADHYKSIVDG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00265 281 MobiDBLite consensus disorder prediction 13 36 - -
Car07g00265 281 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 2 277 - -
Car07g00265 281 Pfam Replication protein A C terminal 166 273 IPR014892 -
Car07g00265 281 CDD RPA2_DBD_D 74 167 - -
Car07g00265 281 PANTHER REPLICATION PROTEIN A-RELATED 2 277 IPR040260 -
Car07g00265 281 SUPERFAMILY "Winged helix" DNA-binding domain 216 277 IPR036390 -
Car07g00265 281 MobiDBLite consensus disorder prediction 15 36 - -
Car07g00265 281 Gene3D - 33 171 IPR012340 -
Car07g00265 281 Gene3D - 210 279 IPR036388 -
Car07g00265 281 PIRSF RPA32 1 279 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Car07g00265 281 SUPERFAMILY Nucleic acid-binding proteins 41 170 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00265 Car-Chr7 2373135 2377232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00265 1 229 Core DNA Replication Machinery Family AT3G02920 48.069 4.77e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00265 K10739 - gmx:100782819 407.912