Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00260 ATGAACAGTTTTGACCCCCAAAGATGGCAACAAGATAATAGAAGAGAAAAGATAATAGATGCATCTTTGAATGTCTATGGAAATACTAGTAACAAGAAAACAAATACGGGAAAGTATAACAAAATTGAAGGGTTCCTTGGAGTAGAAGATGAAGATCTTTTATCCGCAGTTGTTCCTGCTGTCACAGTTGTGTTGGAGGGCCGTGCGATTTGCCAACGCATTAGCCTTCATAATCATGGAAGCTACACAAGTCTCGCCAAGGCTCTCCGCCAGATGTTTGTGgacggcggcgacgaagacgaccacgatgaTCTTGATCTCTCTAATGCCATTCCTGGTCATCTTATTGCTTATGAAGACATAGAGAATGATCTTCTACTTGCTGGTGACCTTACTTGGAAAGATTTTGTACGTGTGGCAAAGAGAATTCGGATAGTTCCGGCGAAGGGGGAGTCAAGGAAATTAGGTACAGCTAGTACAAGAGAGGCATAA 492 0.3902 MNSFDPQRWQQDNRREKIIDASLNVYGNTSNKKTNTGKYNKIEGFLGVEDEDLLSAVVPAVTVVLEGRAICQRISLHNHGSYTSLAKALRQMFVDGGDEDDHDDLDLSNAIPGHLIAYEDIENDLLLAGDLTWKDFVRVAKRIRIVPAKGESRKLGTASTREA 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00260 163 Gene3D - 56 159 - -
Car07g00260 163 PANTHER AUXIN-RESPONSIVE PROTEIN IAA33 7 155 - -
Car07g00260 163 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 155 IPR003311 GO:0005634|GO:0006355
Car07g00260 163 Pfam AUX/IAA family 47 146 IPR033389 -
Car07g00260 163 ProSiteProfiles PB1 domain profile. 58 150 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00260 61 159 B3 DNA Binding Superfamily AT2G46530 29.293 8.69e-06 43.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car07g00260 AUX_IAA 4.1e-12 CL0072