Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00254 ATGGATACTGATGAGGAGTGCTCAATTGTTCTTGAGTTATCTGAAAATGATCCTTTCTTTGATAAAAAGAAGAAATTACTACAAAGTAAGGGGTTTAGTTCCAAGGAACGAATATATCTCAGGTGCTCCTCAGGACCTGCTTGGATGAATGATACTGTAAGGATCTTACTCCAGATTGCAAGAATCATGCAGCTAAATGAGCTGGAACTCTATTTTGCTGAAGATGACACAAAAGTGGAGTTTTACAGCCCCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCACCGACAAATCACTTTCTAGTTGTACAGATTTCCATACAAATATCTTGCAAGGTTTAAGGGAAACAATTCTTGATTTAATTTCTGATTTTGGGGACCAAAATAATGTGAAGGGAGTAATTGAAAAATACCACAGTTGTGACCAAGAAGAATGCCTGGTTGAGTGGGGTAAAAGCCATGGTGTAAAGACACAATTAAAGATAGCTTATGTTGAAGGAGCAGGTCGGGGCATGATAGCAGGGAAAGATCTAAAAGTTGGAGATATTGCTTTAGAAATTCCTGCGTCCATTATCATTTCTGAGGAGCTTGTGCTTGAAACTGATATGTATCGGCTCTTAAAAGAGATTGATGGCATATCTTCTGAGACAATATTGCTATTATGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAACTTACTTTCACACACTTCCAGAAAAATTTAATACAGGATTGAGTTTTGGGATTGAAGCAATTACAATTTTAGATGGAACCTTGCTGTTTGAAGAGATAATGCAAGCAAGACAGCACCTGCATGCTCAGTATGATGAGTTGATTCCACCTTTGTGCAATGGTTATCCTGATATATTTCCTCCAGAGCTGTACACGTGGGAGAAATTTTTATGGGCGTGTGAACTTTGGTATTCCAATAGCATGAAGATAATGTATTCAGATGGGAAGCTGAGGACATGTTTGATCCCTCTTGCTGGCTTTCTTAATCATTCACTGCACCCACATATTATGCACTATGGCAAAGTAGATCCTTCAACAAATTCATTGAAATTTTGTCTATCAAGACCATGCAGAGCTGGAGAAGAATGCTGCTTAAGCTACGGGAACTTATCCAGCTCTCATTTAATAACATTTTATGGTTTCGTACCTCAAGGAGACAACCCATATGACGTTATTCCTTTAGACATTGATGGTTCTGATGTTGATTCTATTGAGAATAAACCTGTGGTTAATTGGGCGACTCACATGGTGCGTGGCACTTGGCTCTCTACCAATCACGACATATTCTATTATGGCCTTCCCTCTCCATTATTGGATCATCTTCGGAGATCTCGAAGTCCTTTGCTGCAAACAAAGACTTTTTTGCAAGGAAACCTAGAAAATGAGCTGGAAGTTCTTGGAGATCTTACATACATCTTTGATGACATGATGGACAATATGGGCGATATCGATCTTGATAACAGAGAAAGCTTCAATTGGGATGAAAAAATGGCCGTGGATTATAAGAATCTACAAAGACGAATTGCCCATTCTGTGTCAACTTCATGTCATAATGGGTTCAGCATGTTGAAGAATGAACTGCTCAAGTGCATGGCTGAAGACATTCTAGGCTAA 1644 0.3881 MDTDEECSIVLELSENDPFFDKKKKLLQSKGFSSKERIYLRCSSGPAWMNDTVRILLQIARIMQLNELELYFAEDDTKVEFYSPRNELEALNSIVLLTDKSLSSCTDFHTNILQGLRETILDLISDFGDQNNVKGVIEKYHSCDQEECLVEWGKSHGVKTQLKIAYVEGAGRGMIAGKDLKVGDIALEIPASIIISEELVLETDMYRLLKEIDGISSETILLLWSMKEKYNCDSKFKTYFHTLPEKFNTGLSFGIEAITILDGTLLFEEIMQARQHLHAQYDELIPPLCNGYPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLHPHIMHYGKVDPSTNSLKFCLSRPCRAGEECCLSYGNLSSSHLITFYGFVPQGDNPYDVIPLDIDGSDVDSIENKPVVNWATHMVRGTWLSTNHDIFYYGLPSPLLDHLRRSRSPLLQTKTFLQGNLENELEVLGDLTYIFDDMMDNMGDIDLDNRESFNWDEKMAVDYKNLQRRIAHSVSTSCHNGFSMLKNELLKCMAEDILG 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00254 547 Pfam Rubisco LSMT substrate-binding 15 104 IPR015353 -
Car07g00254 547 Gene3D set domain protein methyltransferase, domain 1 143 392 - -
Car07g00254 547 CDD SET_LSMT 162 392 - -
Car07g00254 547 ProSiteProfiles SET domain profile. 160 378 IPR001214 GO:0005515
Car07g00254 547 Pfam SET domain 171 378 IPR001214 GO:0005515
Car07g00254 547 PANTHER BNAA07G01600D PROTEIN 3 543 - -
Car07g00254 547 Gene3D - 2 113 IPR036464 -
Car07g00254 547 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 543 - -
Car07g00254 547 SUPERFAMILY SET domain 147 399 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car07g00254 SET 2.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00254 K19199 - gmx:100778605 944.88