Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00253 ATGAAAGAGTATTGGACTTCTTTTGCATCAATTCTTGGTGTCTTTGCTTTTTGTCAAACCATCCTCCAAACGGTGTTCCCACCAGAACTCCGTTTCGCTTTCGCAAAACTCTTCAACCGACTCTTCAACTGTTTCTCCACATACTGTTACTTCGACATAACAGAAATAGACGGCGTCAACACCAACGAACTCTACAACGCCGTTCAGCTTTACCTAAGCTCTTCCGTTTCCATAACCGGCAACCGTCTAAGCCTAACACGCGCTGTTAACTCAAGCGCCTTCACTTTCGGTCTCGCAAACAATGACAGCATCGTCGACACATTTAACGCCGTTAACGTAACCTGGGAACACGTCGTGACTCAGAGAAATACACAAACATTTTCATGGCGTCCATTACCAGACGAAAAACGCGGTTTCACTCTTCGAATTAAGAAAAGAGATAAAAATTTGATTTTAAACTCTTACTTAGAATTCATAATGGAAAAAGCTTGTGAAATTCGAAGAAAAAATCAGGATCGTCTTTTATACACAAATTCAAGAGGTGGATCTTTGGATTCAAGAGGTCATCCATGGGAATCTGTGCCGTTTAAGCATCCAAGTACATTTGATACATTAGCAATGGATCCTTTGAAGAAGAAAGAGATAATGGAAGATTTGATAGATTTTGCAAATGGACAAAGTTTTTATCATAAAACTGGTAGAGCTTGGAAAAGAGGTTATCTTCTTTATGGTCCACCAGGAACTGGTAAATCTAGCATGATTGCTGCTATGGCTAATTATCTTGGTTATGATATTTATGATTTGGAATTAACTGAAGTTCATAATAATTCTGAACTTAGGAAACTTCTTATGAAGACTAGTTCTAAATCTATTATTGTTATTGAGGATATTGATTGTTCTATTAACCTCACTAACAGAAAAAAAGACAAAAATAATGTTTCTGGTTCGAGGAGTTTTTATGACTCGGTTGAAATGCGAggtgttggtggtggtgttggtgttggtggtggtgGTGAAGAAGGTGGGAATTCAATAACGCTCTCTGGGTTATTGAATTTTACTGATGGGTTATGGTCATGTTGTGGGAGTGAGAGGATATTTGTGTTTACTACAAATCACATTGAGAAACTTGATCCAGCTTTGTTGAGAAGTGGGAGAATGGATATGCATATATTTATGAGTTATTGTTCTGTTTCGGCTTTGAAGATTTTGTTGAAAAAGTATTTGGGTGTTGAAGAGGGTGTTGATTTGGATGAGATTGTTTTGAAGGAATTGGAAGAGGTTGTTGAAATAGCGAAGATGACACCAGCTGATATAAGTGAGGTTTTGATTAAGAATAGGAGGAAGAAGGAGAAAGCTGTTGGTGAGTTGTTGGAGATTTTGAAGTCCAAGGCTGAGGAAAATGTGAAAAATGGTGTTCTTGTCCGAGGGGAAAAAGATGATGATGATGTTGAAGAGGAAGAGAAAAGGGCACTTGATAGTGATAGTCCTAAACAGGAATCTGAGATTGAAGATAATTGCAAGGTCTTTACAACCTGA 1539 0.3697 MKEYWTSFASILGVFAFCQTILQTVFPPELRFAFAKLFNRLFNCFSTYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSAFTFGLANNDSIVDTFNAVNVTWEHVVTQRNTQTFSWRPLPDEKRGFTLRIKKRDKNLILNSYLEFIMEKACEIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPLKKKEIMEDLIDFANGQSFYHKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLTNRKKDKNNVSGSRSFYDSVEMRGVGGGVGVGGGGEEGGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSVSALKILLKKYLGVEEGVDLDEIVLKELEEVVEIAKMTPADISEVLIKNRRKKEKAVGELLEILKSKAEENVKNGVLVRGEKDDDDVEEEEKRALDSDSPKQESEIEDNCKVFTT 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00253 512 PANTHER BNAC03G12930D PROTEIN 2 508 - -
Car07g00253 512 Pfam ATPase family associated with various cellular activities (AAA) 241 394 IPR003959 GO:0005524|GO:0016887
Car07g00253 512 MobiDBLite consensus disorder prediction 490 505 - -
Car07g00253 512 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Car07g00253 512 SMART AAA_5 236 397 IPR003593 -
Car07g00253 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 448 IPR027417 -
Car07g00253 512 PANTHER BCS1 AAA-TYPE ATPASE 2 508 - -
Car07g00253 512 CDD AAA 237 298 - -
Car07g00253 512 Gene3D - 192 395 IPR027417 -
Car07g00253 512 MobiDBLite consensus disorder prediction 472 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00253 Car-Chr7 2249001 2250779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00253 211 391 Calmodulin-binding Proteins AT3G56690 24.457 2.07e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00253 - - gmx:100794195 830.476