Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00248 ATGTCACCATCTCCGCCACAACAAGAAGAAGAATTCATATTCCGTTCAAAACTCCCCGACATTCAAATCCCAACACACCTCCCATTACACTCTTACTGCTTCCAAAACCTCTCTCAATTCCACAACCGTCCATGCCTAATCAACGGCGACACCGGAGAAACCCTCACCTACTCCGACGTCCACCTCACCGTCCGCAAAATCGCCGCCGGTCTAAACAGTACTCTCGGAATTAATCAAGGTGACGTCATCATGCTCGTCCTGCGTAACTCTCATCAGTTTGCACTCACCTTCCTCGGTGCTTCATACCGCGGCGCCGTCGTCACCACCGCCAATCCATTCTACACCTCATCGGAACTCGCAAAACAAGCAACCGCAACGAAAACAAAACTCATCGTAACTCAATCCGCATACATAAATAAAATCAACGAATTCGCGAAAATCAATAAGATCAAAATTGTGTGCACTGATTCATCCCCGGCGTCGTCGTCGGATGAAGAGAGTGTTGTGCATTTTTCTGTTTTAACAAACGCTGATGAAAAGGACGCACCTGAAGTGAAAATAAGTCCAAACGACGTCGTTGCGTTACCGTTTTCTTCAGGAACTTCAGGTCTCCCAAAAGGTGTTATGTTAACGCATGAAAATTTAGTTACGACGATAGCGCAGTTAGTTGACGGTGAAAATCCTCATCAATACACTAAGTATGAGGACGTGTTACTGTGTGTGCTACCTATGTTTCATATCTATGCGCTCAATTCGATTTTACTGAGTGGGATTCGATCGGGTGCGGCGGTGCTTATTGTGGAGAAGTTTGAGATTACTACGCTGTTGGAATTGATTGATAAATATAAGGTGACGGTAGTGTCGTTTGTGCCACCTATTGTTTTGGCGTTGGTTAAGAGTGGAGAGTCTAATCGATACGACTTGTCGTGTATTAGGGCGATGATAACTGGTGCTGCTCCAATGGGAGTGGAACTTGAACAAGCTGTCAAGGATAGGCTACCACAAGCCATACTTGGACAGGGATATGGAATGACGGAGGCAGGACCACTTTCAATTAGCATGTCATTTGCAAAGGAAGCAATGGGGACAAAACCTGGTGCATGCGGGACCGTCGTAAGAAACGCCGAGATGAAAATCGTTGACACAGAGACCGGTCATTCCCTTCCAAGAAACAAACCCGGTGAAATTTGCATTAGAGGCACAAAGGTTATGAAAGGATATCTAAATGATCCAGAGGCGACAAAGAGAACTATAGACAAAGATGGATGGCTGCACACAGGTGATATTGGTTTAATTGATGATGATGATGAGCTCTTCATTGTTGATCGGTTAAAGGAATTGATTAAATACAAAGGATACCAAGTTGCTCCTGCAGAGCTTGAAGCATTATTGATTTCCCACCCAAACATTTCTGATGCTGCTGTCGTACCATTGAAAGATGAAGCTGCGGGAGAAGTCCCAGTTGCATTTGTTGTAAGATCAAACGGTTCAAAGATAACCGAGGATGAAATCAAGCAATACATTTCAAAACAGGTTGTTTTTTACAAGAGAATAAACATTGTTTTCTTCGTAGACACTATTCCTAAAGCGGCTTCAGGGAAAATTCTGCGTAAGGAATTAACTGCAAGACTTAACGAAGGTTTGGTGGTGGCCACTTAA 1659 0.4412 MSPSPPQQEEEFIFRSKLPDIQIPTHLPLHSYCFQNLSQFHNRPCLINGDTGETLTYSDVHLTVRKIAAGLNSTLGINQGDVIMLVLRNSHQFALTFLGASYRGAVVTTANPFYTSSELAKQATATKTKLIVTQSAYINKINEFAKINKIKIVCTDSSPASSSDEESVVHFSVLTNADEKDAPEVKISPNDVVALPFSSGTSGLPKGVMLTHENLVTTIAQLVDGENPHQYTKYEDVLLCVLPMFHIYALNSILLSGIRSGAAVLIVEKFEITTLLELIDKYKVTVVSFVPPIVLALVKSGESNRYDLSCIRAMITGAAPMGVELEQAVKDRLPQAILGQGYGMTEAGPLSISMSFAKEAMGTKPGACGTVVRNAEMKIVDTETGHSLPRNKPGEICIRGTKVMKGYLNDPEATKRTIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGYQVAPAELEALLISHPNISDAAVVPLKDEAAGEVPVAFVVRSNGSKITEDEIKQYISKQVVFYKRINIVFFVDTIPKAASGKILRKELTARLNEGLVVAT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00248 552 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Car07g00248 552 SUPERFAMILY Acetyl-CoA synthetase-like 10 546 - -
Car07g00248 552 Gene3D - 445 548 IPR045851 -
Car07g00248 552 Pfam AMP-binding enzyme 36 450 IPR000873 -
Car07g00248 552 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Car07g00248 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 544 - -
Car07g00248 552 CDD 4CL 23 540 - -
Car07g00248 552 Gene3D - 6 444 IPR042099 -
Car07g00248 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 8 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00248 Car-Chr7 2202721 2209326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00248 11 512 Monolignol Biosynthesis Gene Families AT1G51680 64.229 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00248 K01904 - gmx:100810418 838.565