Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00247 ATGAATAATTTCCACCATAATAATTACAATATTAATACTTCTCTTCACTTAATTAACCAACAAGCAGATGAGGAGAATCATCTAAATCTAGATCTTCTCCTTGAACCATCTTCTTCATCCTCTTCATCTTCACCTATTAGTTCCATGGAACAAAGTACTCCAAGGGTATTCTCATGCAACTATTGTCAGAGAAAGTTTTACAGTTCTCAAGCACTAGGAGGACACCAAAATGCTCACAAACTTGAAAGAACACTTGCAAAGAAGAGCAGAGAGATTAGTTCAGCCATGCAATCTTATTCTTATGTTGAGCCTGCAGAACAAAGATCAAATTTCAGTTCTTCTTCACAGTACCATGCTCATCTTCAAAACTATGGACATGGTGGAAGAAAAGAGTTCAGTTATGGAAATTCTAGTAATTCTGAACATGTTCAGGAAGATATTAGCCAACTTGACTTGTCTCTAAGGCTTTGA 471 0.3609 MNNFHHNNYNINTSLHLINQQADEENHLNLDLLLEPSSSSSSSSPISSMEQSTPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSREISSAMQSYSYVEPAEQRSNFSSSSQYHAHLQNYGHGGRKEFSYGNSSNSEHVQEDISQLDLSLRL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00247 156 Gene3D Classic Zinc Finger 37 116 - -
Car07g00247 156 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
Car07g00247 156 PANTHER ZINC FINGER PROTEIN JAGGED 9 156 IPR045320 GO:0003700
Car07g00247 156 PANTHER BNAC02G44440D PROTEIN 9 156 - -
Car07g00247 156 Coils Coil 78 98 - -
Car07g00247 156 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 84 IPR013087 -
Car07g00247 156 SUPERFAMILY beta-beta-alpha zinc fingers 55 84 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00247 Car-Chr7 2196297 2196767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00247 8 156 C2H2 Transcription Factor Family AT5G57520 51.282 3.89e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car07g00247 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00247 - - gmx:100781826 144.05