Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00239 ATGTGTAATAAAGTGTTTCAATGTTTGAGCGAGTCTGAGTCTGTAATTGATCATAGACAACACTTTATCATGGATAGTCCCACTGCCATTCGATCCCCGGCCACAACCACCGGATCGGGTGGTTCGAACGACGATGGCCGGCGTGTCAAATTCTTGTGTAGCTTTCTAGGTAGCATAATGCCACGTCCACAAGATGGGAAACTGCGTTATGTTGGTGGAGAGACAAGAATTGTGAGTGTTTTGAGAGATATTAGCTTTGATGAGTTGATGGGAAAGATGAGGGAGTTGTATGAAGGTGTTGCTGTTTTGAAGTATCAGCAGCCTGATGAAGATCTTGATGCCCTTGTTTCTGTTGTTAATGATGATGATGTGGTTAACATGATGGAAGAGTATGACAAGTTAGGTTCAGGAGATGGGTTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATCCGAACAGGATGGTTCACACTTTATTGATGGGGATGATTCTGAGAGGAGGTATGTGGATGCATTGAATAGTTTAAATGATGCTTCTGAGTTTAGGAGATTGCAACAAATGGAGTTTCCTATGGTCGAGGATATCCATGTGCCTGATCAGTTCATTAATCCGATCAGCGTCGAGAATGGGATTCATAGCCAAAGAAGTGGGGAAATAGCAATGTCCCAATACAATTTGCATCATATCCCTATCCAGCACCAGCAGCAACCTATGAACCAGAGGTATAGCGAAATTGATGCTCCGTGGAATCCTGCTTATTACTCTCCTAGACATCATGGTCAGTGTCTCCATGACTCCAGATCATTGGTTGAGTTCCCATCTTCTCCTTCTGGCACAAGGTACCGTATGCCGTTTCCTGAGATGCCAGATAAGGGCACTGATAGAGTGTCGGATGAGTATGCTCGACATCATGTAAATCATCATCCTATGTACGACCCACAGTATCCCGAAAATGTTGTTTGGATGCCAACTGGAGCACCACCACAGGGTGATAAGTCTGGTTTTCCAGGCAACATTCTTCATGGTTCCCATGCTCATGATGGGAATAGTATATGCGAGCATTGTCGCATGAGTTTTCAGAGACCTCCACCGCATTTGGAACATCCTAATATACTTCCACCTGTTGCCATTCCATGTCAAGAATGCCACCCAAGTATGGATGCTCTCACAGTGAATGCTGATGCCAAGTTACAGCCTGCTATGTATCCTAATGAACAAAATAGTGATCCTAGGTCTGTTTATAACGATTCTCAGAATCTCGAGAGAGGATGGGGTTTGCAGCGTCAGAGTTCTTCTAGGGCTGAGGAACCAAGAGGACATGTCTCTGGATCAGGAAGAGTGAATGATCATTTTGTTGGTGATGTTCCTATCATTAATTTCCCTCCCGGACATGGTAGTATGATCGATGGACACACTTTTCCTTCCAATCACGTTCATCAACAAGCTGGACCTGAATTAGGCGTTGAACTGTTTCCTGACCAAGCCATGGCTGCTTTACCACATCTACAAATTCCTCCTTTGGAAGAACCCATTGTGCAGTATGGAAATACTACTTCTCCTTATGGAGTAGATAATAATTACGCCATGCCTCGTGGACACGCGCCTGGTTATACTCTCTGGAGAAATGGTCCAACTCCGGTTCATATTGGACCACAGCACGAGGTAACTACTCTACCTCAGCCGGTTGACGGTGTTATGAATGCTGGAATAATCAGGGGAGAGGGCAATCCAGGATTTTTTGTTGGACCAGATAGCCAAAGTGTTTGGGTTGATTCCTCACAGAAATTTCCGGGTCATGATGTGTCAGCCATCCCTGAATACCCTTATGCAAATGTGCCAAAGTTGAATCCGGTGGCCATTGGTCAGGAAAATCAACCTCCAGTTATCGTAGATGTCATTCATCCCCCACAGGACATAATTGCTGGTGCCTGCTTGGAATCTATGCAGCTGCAACAACCATCTTTTAATATGGTTCGCAATAATGAAGTTTTGAAAAACGATACTCATTTGACTGAAGCGATGGGTTTGCAATCTTCAAGTTTGCTTGGGGAAGGAAAAGAGGCAAAAAATGAGGACAAGGTTGAGAACACTAATGTGCAAAGTATATCTTTTAAAGAGCAAAATCAAATTGTTGAAGATGTATCCAACACAGCCGCTTCTGTTGTGGAATGTAATAAGTGTGGAGATGCTGAGAAGCTGGCTGATAAGGACTGTTCTCCTCGTGAAGATTCTAAGGATTTAGCTGATCAATTCATTTTCTTGCCTGAGTTGATTGCTTGTGTTAAAAAGGCTGCATTAGAAAGTCACGACGAGGTGAAACCTACAGCTGAAGAGCACGATGGCTCTCAGAAGCACAATTCAATTGCCAAAGAAGAAACAGAAAATGAAGTTGAACCAGTGAATGCTCATGGTGATGTAGAATTGGACACCGAAAACGACCATGTAGATACTTCTAAAATTGAGCCTACAAAGGCTGAGGCAGAAGCAATTGCTAGGGGATTGCAGACGATTAAAAATGATGATTTGGAGGAGATCCGTGAGCTAGGTACTGGAACTTATGGGGCTGTTTATCACGGGAAATGGAAAGGTTCTGATGTTGCCATTAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGACCATCTGAAAGAGCAAGATTGATTGCAGATTTCTGGAAGGAGGCATTGATGCTGAGTTCATTGCATCATCCGAATGTTGTCTCCTTCTATGGTATTGTTCGTGATGGTCCTGATGGGTCTTTAGCAACAGTGACAGAATTCATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAAGACAGAACGATAGATCGTCGGAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTTAATATGAGAGATCCACAACGGCCTGTCTGCAAGATTGGTGATTTAGGTCTATCAAAAGTTAAACAGCATACTCTAGTGTCTGGAGGGGTACGCGGAACTTTGCCATGGATGGCACCTGAACTTCTTAGCGGGAAAAGCAATATGGTGTCGGAGAAGATCGATGTTTACTCGTTCGGGATAGTCATGTGGGAATTACTCACAGGGGATGAACCTTATGCTGATTTGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACAGTTTGCGTCCTCAAATCCCGACATGGTGCGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTGATCCTACAGAAAGACCATCGTTTTCCGAAATCTCGAAGAAGCTAAGGAGTATGGCTGCTTCAATGAATGTGAAATAG 3348 0.4343 MCNKVFQCLSESESVIDHRQHFIMDSPTAIRSPATTTGSGGSNDDGRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVLRDISFDELMGKMRELYEGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSHFIDGDDSERRYVDALNSLNDASEFRRLQQMEFPMVEDIHVPDQFINPISVENGIHSQRSGEIAMSQYNLHHIPIQHQQQPMNQRYSEIDAPWNPAYYSPRHHGQCLHDSRSLVEFPSSPSGTRYRMPFPEMPDKGTDRVSDEYARHHVNHHPMYDPQYPENVVWMPTGAPPQGDKSGFPGNILHGSHAHDGNSICEHCRMSFQRPPPHLEHPNILPPVAIPCQECHPSMDALTVNADAKLQPAMYPNEQNSDPRSVYNDSQNLERGWGLQRQSSSRAEEPRGHVSGSGRVNDHFVGDVPIINFPPGHGSMIDGHTFPSNHVHQQAGPELGVELFPDQAMAALPHLQIPPLEEPIVQYGNTTSPYGVDNNYAMPRGHAPGYTLWRNGPTPVHIGPQHEVTTLPQPVDGVMNAGIIRGEGNPGFFVGPDSQSVWVDSSQKFPGHDVSAIPEYPYANVPKLNPVAIGQENQPPVIVDVIHPPQDIIAGACLESMQLQQPSFNMVRNNEVLKNDTHLTEAMGLQSSSLLGEGKEAKNEDKVENTNVQSISFKEQNQIVEDVSNTAASVVECNKCGDAEKLADKDCSPREDSKDLADQFIFLPELIACVKKAALESHDEVKPTAEEHDGSQKHNSIAKEETENEVEPVNAHGDVELDTENDHVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGTGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYADLHCASIIGGIVNNSLRPQIPTWCDPEWKSLMESCWASDPTERPSFSEISKKLRSMAASMNVK 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00239 1115 Pfam Protein tyrosine and serine/threonine kinase 843 1105 IPR001245 GO:0004672|GO:0006468
Car07g00239 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 967 979 IPR008271 GO:0004672|GO:0006468
Car07g00239 1115 Gene3D Transferase(Phosphotransferase) domain 1 929 1115 - -
Car07g00239 1115 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 1115 - -
Car07g00239 1115 CDD PB1_UP2 52 148 - -
Car07g00239 1115 SMART PB1_new 63 148 IPR000270 GO:0005515
Car07g00239 1115 PANTHER - 29 1115 - -
Car07g00239 1115 SUPERFAMILY CAD & PB1 domains 65 154 - -
Car07g00239 1115 Gene3D - 67 151 - -
Car07g00239 1115 ProSitePatterns Protein kinases ATP-binding region signature. 848 869 IPR017441 GO:0005524
Car07g00239 1115 ProSiteProfiles Protein kinase domain profile. 842 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00239 1115 PRINTS Tyrosine kinase catalytic domain signature 924 937 IPR001245 GO:0004672|GO:0006468
Car07g00239 1115 PRINTS Tyrosine kinase catalytic domain signature 961 979 IPR001245 GO:0004672|GO:0006468
Car07g00239 1115 PRINTS Tyrosine kinase catalytic domain signature 1032 1054 IPR001245 GO:0004672|GO:0006468
Car07g00239 1115 PRINTS Tyrosine kinase catalytic domain signature 1076 1098 IPR001245 GO:0004672|GO:0006468
Car07g00239 1115 SMART serkin_6 842 1109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00239 1115 MobiDBLite consensus disorder prediction 424 448 - -
Car07g00239 1115 CDD STKc_MAP3K-like 848 1105 - -
Car07g00239 1115 MobiDBLite consensus disorder prediction 771 824 - -
Car07g00239 1115 Pfam PB1 domain 64 149 IPR000270 GO:0005515
Car07g00239 1115 MobiDBLite consensus disorder prediction 268 295 - -
Car07g00239 1115 Gene3D Phosphorylase Kinase; domain 1 827 928 - -
Car07g00239 1115 SUPERFAMILY Protein kinase-like (PK-like) 834 1103 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00239 Car-Chr7 2124558 2130558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00239 43 1115 MAP Kinase Kinase Kinase AT5G57610 54.422 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Car07g00239 PK_Tyr_Ser-Thr 3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00239 - - gmx:100779077 1679.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00239 07 2124558 2130558 Car01g01456 01 24641443 24652505 PCT