Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00233 ATGGTGTCTCCAAAAACTATAGGGAAGTATAAGCTTGGCAGGACAATAGGAGAAGGTGCATTCTCTAAGGTTAAACTTGCTTTCAATAGCAACAATGGTGAAAAAGTTGCAATCAAGGTCATTGACAAACATATGGTCATGAAAAACAATCTTAAGCATCAGGTGCAAAGTGAAATTAGAACAATGAAACTTCTAAATCATCCTAATATTGTTAGAATTCATGAGGTTCTTGGCACAAAAACAAAAATATACATTGTGATGGAATATGTATCTGGAGGTCAACTATTGGACAAGATGACTTATGCCAATAAATTGAATGAACGTGAGGCAAGAAAACTATTCCAGCAACTTATTGATGCTGTGGACTACTGCCATAACAAGGGAGTTTATCATAGAGATCTTAAGCCAGAAAACTTGCTCCTTGACAGCAAGGGAAATCTCAAAGTGTCTGATTTTGGATTAAGTGCACTGAAAAAGCCTGATAATGTCTTAAACACAAGGTGTGGTTCCCCGTGCTATGTGGCTCCCGAGCTTCTGGTGAGCAAAGGGTATGATGGAGCAGCTTCTGATGTTTGGTCATGTGGAGTAATTCTTTTTGAATTACTTGCTGGTTTTCTACCATTTGATGACCCGAACTTGATGAGCTTataccataagATATGCCGAGCAGAATATATATGTGCCCCTTGGTTTAGTCAAAGTCAGAAGACACTAATCGCCAAAATACTTGAACCACGTCCTGGAAAGCGGATAACTATATCGAATATTATTGAAGATGAGTGGTTTCAAACAGATTATAAGCCTGCTTGCGCGTATGAATTTGATCCGACCGTTAACATGGATGACGATAGCGCTGCTTTCAATTCAATTGAGAAAACTACAAAGTCAAAAATATCCAAGTCATCAAGCTTCATTAATGCGTTTGAATTGATAGCCATGTTTCAGGACCTTGATCTATCTGCTCTTTTTGAAGAACAGGATCACAAGAAGCAGACAAGGAGGTTTGGATCCCAACACACAATCATTGAAACCATAGAAAAAATAGAAGCTGCTGCAACACATGCGAGACTGTCAGTAGAAAAAATGAACAACTTTAAGATAAAATTGCACCCGAAACAAACAATGACTAGGTATTCTAGATCATACTTTGATCTATCAGCTAAGGTGACAGAAGTTGCACCAACTCATTGTGTTGTAGAAATATCAAAATCTGCAGGAGATCTAAGAATGTACAATGAATTTTGTGAAAGCTTATCAAGTCTGCTGAAACAAAAATCTAGAGTGTCATCAGAAGGCGAAGACTTGGTAGATCAATGCGACGCTGGAGGCATAGAAAAGCAAGATGCTGAATTGTAG 1356 0.3798 MVSPKTIGKYKLGRTIGEGAFSKVKLAFNSNNGEKVAIKVIDKHMVMKNNLKHQVQSEIRTMKLLNHPNIVRIHEVLGTKTKIYIVMEYVSGGQLLDKMTYANKLNEREARKLFQQLIDAVDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALKKPDNVLNTRCGSPCYVAPELLVSKGYDGAASDVWSCGVILFELLAGFLPFDDPNLMSLYHKICRAEYICAPWFSQSQKTLIAKILEPRPGKRITISNIIEDEWFQTDYKPACAYEFDPTVNMDDDSAAFNSIEKTTKSKISKSSSFINAFELIAMFQDLDLSALFEEQDHKKQTRRFGSQHTIIETIEKIEAAATHARLSVEKMNNFKIKLHPKQTMTRYSRSYFDLSAKVTEVAPTHCVVEISKSAGDLRMYNEFCESLSSLLKQKSRVSSEGEDLVDQCDAGGIEKQDAEL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00233 451 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Car07g00233 451 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
Car07g00233 451 Pfam NAF domain 303 361 IPR004041 GO:0007165
Car07g00233 451 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00233 451 CDD CIPK_C 306 424 - -
Car07g00233 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Car07g00233 451 PANTHER SERINE/THREONINE KINASE 6 430 - -
Car07g00233 451 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 430 - -
Car07g00233 451 Gene3D Kinase associated domain 1, KA1 300 425 - -
Car07g00233 451 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Car07g00233 451 SUPERFAMILY Protein kinase-like (PK-like) 6 275 IPR011009 -
Car07g00233 451 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00233 451 Gene3D Transferase(Phosphotransferase) domain 1 90 286 - -
Car07g00233 451 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00233 Car-Chr7 2083182 2086927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00233 7 447 CBL-interacting serine-threonine protein kinases AT1G01140 48.993 2.98e-146 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car07g00233 Pkinase 3.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00233 - - mtr:MTR_4g128820 756.903