Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00228 ATGGAACTTGCTTCACCTTCTAGAATACTAATTGGCCTCTCATTAGACCCAAATGATAGCAAGGAGCTTCTATCATGGACAATAAGAGTTCTAGCTAATCCAAATGATACCATTGTTGCAGTGCATGTTCTTGTTGTTGAGAATATGAAGAAACGTGTGTCGGTCAGAAAAAGACAATCACAACTCAGACAGGCAAAAGCATATGTTATATCTGTGCTTGGAGAATTTGCACAGACTTGTTGGTCTAAACAGGTTAATTTGGAGGCAAAAGTGGCACTGAGTTCCACAGTAGGTGGTGGTTTAGTGGAGGAAGCAAAGTCCATTTCTGCTGATTTTCTTGTTCTTCGTGGATCAAGAAACCAAACAAGTTATAAAATTGGAACCTCTAAAGGAATTACCAAGTATTGCTTTGAGCATGCACATGAAGGCTGTACAATGGTCTCAGTTGGGAGATGCACAAAGTCAGAACAGaatgtcaattcaaattcaatacattttcaagATAATAGTCAACCAAATTCAAGGCAGAACAGTTCACCAAGAACAGTACTAGATGCATTAGAAGGACAATCCAACTGCACAGAAGATGACACTTTTAGCACCAGAGCCTCAAGCATGACATATACTCCTTCATCTGGTCCTAAGATTAAGAGAAAATCAAAGTTAAGAAAATCACAATTCTCATTCAGGTTCATAATATCATTCCTTGGTTCACCATTCAGAATAAAAGGCTTCAACATGTCCAAAAATGAAAGTCATCAACCTTTGTTGAAGTGCTTCAGCTATGAAAATATATCCAATGCTACTAATGACTTTCACCAAGATAATTTGGTTGGAAGAGGAGGGTACTCAGAAGTATACAAAGGTGATATTGGTAATGGAGAAACCATTGCTGTGAAGAGGTTAGCCAAAGACAACAAAGATCCAAACAAGGAAAAAGAGTTCCTTATGGAGTTGGGTGTTATTGGACATGTTTGTCATCCTAATACTGCAAATTTGTTGGGCTATTGCATTGAAAATGGACTCTATCTGATTTTCAATTACTCTCAAAATGGAAACTTGGCAACTGCATTGCATGGTTATGGTAAAGAAGGAAATTCACTTGACTGGCCAATCAGATACAAAATTGCAATTGGAGTAGCAAAGGGTCTCCATTATCTTCATAAATGTTGCAAACACAGAATAATTCACCGTGACATTAAAGCCTCCAATGTTCTTCTTGGTCCTGATTATGAACCACAGATTACAGATTTTGGACTTGCAAAGTGGCTTCCTAACAAGTGGACTCACCATGCTGTAATCCCTGTGGAAGGAACATTTGGATATTTAGCACCAGAGGTGTTTATGCATGGTATTGTTGATGAGAAAACAGATATATTTGCATTTGGTGTTCTTCTTCTTGAAATAGTAACTGGAAGAAGACCTGTTGATTCATCAAAGCAAAACATTCTCCTATGGGCAAAGCCTCTGATGGAATCAGGGAATATTGTTGAGCTGGCTGATACAAGAATGGAAGGTAAATATGATGCAGAGCAACTGTATAGGGTAGTCCTAACTGCTTCATACTGTGTCAGACAAACTGCCATTTGCCGTCCTGCAATGACCGAGGTGCTAGAGTTGCTAACAAGTGGCCAAAACAGTGAAGTTGGAAAGAGCTGGAGAATTCCAAAGTTCACTTCTGATGAATTGGATGATTACTCAATGATTTTTGGATATGATGTCCCCTCAGACATATCTCTAGAGGATTATTTGTGA 1755 0.3818 MELASPSRILIGLSLDPNDSKELLSWTIRVLANPNDTIVAVHVLVVENMKKRVSVRKRQSQLRQAKAYVISVLGEFAQTCWSKQVNLEAKVALSSTVGGGLVEEAKSISADFLVLRGSRNQTSYKIGTSKGITKYCFEHAHEGCTMVSVGRCTKSEQNVNSNSIHFQDNSQPNSRQNSSPRTVLDALEGQSNCTEDDTFSTRASSMTYTPSSGPKIKRKSKLRKSQFSFRFIISFLGSPFRIKGFNMSKNESHQPLLKCFSYENISNATNDFHQDNLVGRGGYSEVYKGDIGNGETIAVKRLAKDNKDPNKEKEFLMELGVIGHVCHPNTANLLGYCIENGLYLIFNYSQNGNLATALHGYGKEGNSLDWPIRYKIAIGVAKGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPEVFMHGIVDEKTDIFAFGVLLLEIVTGRRPVDSSKQNILLWAKPLMESGNIVELADTRMEGKYDAEQLYRVVLTASYCVRQTAICRPAMTEVLELLTSGQNSEVGKSWRIPKFTSDELDDYSMIFGYDVPSDISLEDYL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00228 584 Gene3D Phosphorylase Kinase; domain 1 244 348 - -
Car07g00228 584 Gene3D Transferase(Phosphotransferase) domain 1 350 555 - -
Car07g00228 584 MobiDBLite consensus disorder prediction 192 219 - -
Car07g00228 584 MobiDBLite consensus disorder prediction 192 214 - -
Car07g00228 584 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 116 - -
Car07g00228 584 CDD USP_Like 8 141 - -
Car07g00228 584 SMART serkin_6 272 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00228 584 PANTHER OS08G0249100 PROTEIN 7 574 - -
Car07g00228 584 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Car07g00228 584 ProSiteProfiles Protein kinase domain profile. 272 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00228 584 Pfam Protein kinase domain 272 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00228 584 Pfam Universal stress protein family 8 144 IPR006016 -
Car07g00228 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Car07g00228 584 Gene3D HUPs 2 149 IPR014729 -
Car07g00228 584 SUPERFAMILY Protein kinase-like (PK-like) 247 541 IPR011009 -
Car07g00228 584 PANTHER OS08G0249100 PROTEIN 7 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00228 Car-Chr7 2035484 2039658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00228 260 580 Trihelix Transcription Factor Family AT1G70460 38.938 3.15e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Car07g00228 Pkinase 4.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00228 - - ccaj:109809416 993.416