Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00227 ATGGGATCCTCCTGCAGTTGTTGTGGCTCAGAGAAGGTTGAAGAAGTGCCAACGTCATTTGGTGTAGCTAATAATTCTTGGAGAATATTCACATACAAGGAGTTGCATGCAGCTACTAATGGGTTCAGTGATGATTATAAACTTGGTGAAGGTGGATTTGGAAGTGTTTATTGGGGAAGAACAACTGATGGTCTCCAGATAGCAGTGAAGAAACTGAAAGCAATGAACTCAAAAGCAGAAATGGAATTTGCTGTAGAAGTTGAAGTGCTTGGAAGGGTCAGGCACAAAAATTTATTGGGTCTTAGGGGCTATTGTGTTGGAGATGATCAACGACTTATTGTGTATGATTACATGCCAAATCTCAGTCTTCTTTCTCATCTCCATGGTCAGTTTGCTATTGAAGTGCAACTCAATTGGCAAAGGAGAATGAACATAGCAATTGGCTCTGCCGAAGGCATTTTGTACTTGCACCAAGAGGTCACACCCCACATTATCCATAGAGATATCAAAGCAAGTAATGTTTTGCTTGATTCAGATTTTGTGCCTCTAGTTGCTGATTTTGGGTTTGCAAAGCTAATCCCAGAAGGAGTTAGTCACATGACAACTCGTGTCAAAGGTACCTTAGGATACTTAGCACCTGAGTATGCCATGTGGGGTAAGGTTTCTGAAAGTTGTGATGTTTATAGTTTTGGAATTCTTCTTTTAGAGCTTGTAACTGGTAGAAAGCCCATTGAAAAACTACCTGGTGGGCTTAAGAGAACAATAACTGAATGGGCCGAGCCTTTAATAACCAAAGGAAGGTTTAGAGATCTTGTTGATCCAAAACTAAGAGGAAACTTTGATGAAAATCAAGTGAAACAAACAATTAATGTGGCTGCTCTTTGTGTGCAAAGTGAACCTGAAAAACGACCAAATATGAAGCAAGTTGTTAACCTTTTGAAAGGATATGAAGCTGATCAAGGGAAAGTGACTAAGATGAGAATAGATAGTGTCAAGTATAATGAGGAATTATTGGCACTTGACCAACCTAGTGATGATGATTATGATGGAAATAGTAGTTATGGTGTTTTCAGTGCTATTGATGTTCAAAAGATGAATGATCCGTATTACAAGCGTGGTGATAACAAGAAAATTTGA 1137 0.3896 MGSSCSCCGSEKVEEVPTSFGVANNSWRIFTYKELHAATNGFSDDYKLGEGGFGSVYWGRTTDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFAIEVQLNWQRRMNIAIGSAEGILYLHQEVTPHIIHRDIKASNVLLDSDFVPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPLITKGRFRDLVDPKLRGNFDENQVKQTINVAALCVQSEPEKRPNMKQVVNLLKGYEADQGKVTKMRIDSVKYNEELLALDQPSDDDYDGNSSYGVFSAIDVQKMNDPYYKRGDNKKI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00227 378 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Car07g00227 378 Gene3D Transferase(Phosphotransferase) domain 1 118 337 - -
Car07g00227 378 Pfam Protein tyrosine and serine/threonine kinase 47 313 IPR001245 GO:0004672|GO:0006468
Car07g00227 378 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00227 378 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Car07g00227 378 ProSiteProfiles Protein kinase domain profile. 42 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00227 378 CDD STKc_IRAK 48 315 - -
Car07g00227 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Car07g00227 378 PANTHER OS01G0750732 PROTEIN 1 376 - -
Car07g00227 378 SUPERFAMILY Protein kinase-like (PK-like) 26 319 IPR011009 -
Car07g00227 378 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00227 Car-Chr7 2030562 2032747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00227 1 364 Trihelix Transcription Factor Family AT1G70460 43.386 2.39e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Car07g00227 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00227 - - gmx:100783365 689.878