Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00201 ATGCCTCTCAAATTCGTTGTTCTCCTCATCTTTTTCCTCTCCCATCAAGCTCTCTCTTCTGCTTCCGAGCCTCGCAACCCCGAAGTGGAGGCTTTGATGAGCATAAAGGAAGCTCTAAATGATCCACACAGTGTATTAAGCAACTGGGATGAATTCTCCGTAGACCCTTGTAGTTGGGCTATGATCACTTGTTCTTCTGATTCCTTTAAACTAGAATTTTTGTTTTTTTTTTTGTACAGGGGAGCACCGAGTCAATCTCTCTCTGGAACTTTGTCTTCAGCAATTGGAAATTTAACCAATCTTAAACAAGTGTTACTGCAGAATAATAACATCTCAGGCAAAATACCTCCGGAACTTGGAAAACTTCCCAAGCTTCAGACTTTAGATCTTTCAAATAATAGATTCTCTGGTTTCATTCCACCTTCTCTGAGTCAATTCAATAGTCTTCAGTACCTGAGGCTCAACAACAATAGCTTGTCTGGACCATTTCCCGTTTCACTGTCAAAAATCCCACAACTTGCTTTCTTGGACTTGTCTTTTAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCTAGGTCATTCAATATTGTGGGGAACCCTTTAATTTGTGCAAGTAGCTCTACTGAAGGCTGCTCTGGATCAGTTACCCTTATACCGATTTCTTTTTCTCAAGCATCATCACAAGGAAAACACAGGTCCAAAAAACTAGCAATTGCACTTGGAGTAACCTTTAGTTTTGTTTCTCTTGTGGTCCTATTTTTGGGGATCTTTTGGTATAGAAAGAAAAGACAACATGGAGCCATCTTGTATATTGGTGATTATAAAGAAGAGGCAGTTGTTAGCTTAGGAAATCTTAAAAAATTCAGTTTCAGAGAGCTCCAACATGCAACAGATAATTTCAGCTCTAAGAATATACTTGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGGAAGCTTGGAGATGGCACGATGGTGGCGGTGAAAAGGCTGAAAGATGTAAATGGTAGTGCTGGAGAATTACAGTTCCAAACAGAATTGGAGATGATAAGCTTGGCAGTTCACCGCAATTTACTTAGATTAATTGGTTATTGTGCTACATCTAATGAAAAACTTCTGGTCTACCCTTATATGTGTAATGGCAGTGTGGCCTCCAGGCTTAGAGGAAAACCagctttagattggaacacaagaaagcggatagcaattggagctgccaggggccttttgtatcttcatgagcaatgtgatcctaagataatacacagagatgtaaaggctgccaatgtgcttctagatgacgattatgaggctattgttggtgattttggCCTTGCCAAGCTCCTAGATCATGCTGATTCCCATGTCACCACTGCTGTTCGTGGCACTGTTGGGCACATTGCACCGGAGTACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTGTTTGGATTCGGCATTCTCTTGTTAGAGCTTATAACTGGAATGACAGCCCTTGAGTTTGGGAAAACCTTGAATCAAAAAGGTGCTATGCTAGAGTGGGTTAGGAAAATACAGCAAGAAAAGAAGGTTGCAGTGTTGGTGGACAAAGAACTAGGGAGCAACTATGATAAAATAGAGGTTGGGGAAATGCTGCAAGTAGCTTTACTTTGTACTCAATATTTAACAGCACACCGACCAAAAATGTCTGAAGTGGTCAGAATGCTTGAAGGAGATGGACTTGCTGAGAAATGGGCATCAACACATAATTATGGTAGTAATTGTTGGAGCCATAGTCATAGCAACAGTAGCAATAGCTCCTCTTCTCGTCCTACCTCTGCTTCCAAACACGATGACAGTGTTCATGATCGATCAAGCATGTTTGGCTTGACGATGGACGATGATGATGATCAGTCATTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGATAA 1938 0.3813 MPLKFVVLLIFFLSHQALSSASEPRNPEVEALMSIKEALNDPHSVLSNWDEFSVDPCSWAMITCSSDSFKLEFLFFFLYRGAPSQSLSGTLSSAIGNLTNLKQVLLQNNNISGKIPPELGKLPKLQTLDLSNNRFSGFIPPSLSQFNSLQYLRLNNNSLSGPFPVSLSKIPQLAFLDLSFNNLSGPLPKFPARSFNIVGNPLICASSSTEGCSGSVTLIPISFSQASSQGKHRSKKLAIALGVTFSFVSLVVLFLGIFWYRKKRQHGAILYIGDYKEEAVVSLGNLKKFSFRELQHATDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVNGSAGELQFQTELEMISLAVHRNLLRLIGYCATSNEKLLVYPYMCNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDDYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTLNQKGAMLEWVRKIQQEKKVAVLVDKELGSNYDKIEVGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASTHNYGSNCWSHSHSNSSNSSSSRPTSASKHDDSVHDRSSMFGLTMDDDDDQSLDSYAMELSGPR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00201 645 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515
Car07g00201 645 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Car07g00201 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Car07g00201 645 MobiDBLite consensus disorder prediction 590 608 - -
Car07g00201 645 SUPERFAMILY Protein kinase-like (PK-like) 283 571 IPR011009 -
Car07g00201 645 Gene3D Phosphorylase Kinase; domain 1 272 377 - -
Car07g00201 645 PRINTS Leucine-rich repeat signature 170 183 - -
Car07g00201 645 PRINTS Leucine-rich repeat signature 125 138 - -
Car07g00201 645 MobiDBLite consensus disorder prediction 609 625 - -
Car07g00201 645 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 645 - -
Car07g00201 645 MobiDBLite consensus disorder prediction 590 645 - -
Car07g00201 645 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 645 - -
Car07g00201 645 Pfam Protein tyrosine and serine/threonine kinase 304 570 IPR001245 GO:0004672|GO:0006468
Car07g00201 645 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Car07g00201 645 Gene3D Ribonuclease Inhibitor 25 214 IPR032675 -
Car07g00201 645 ProSiteProfiles Protein kinase domain profile. 301 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00201 645 SMART serkin_6 301 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00201 645 SUPERFAMILY L domain-like 26 224 - -
Car07g00201 645 Gene3D Transferase(Phosphotransferase) domain 1 378 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00201 Car-Chr7 1730595 1735034 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00201 26 645 Receptor kinase-like Gene Family AT5G16000 63.217 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Car07g00201 PK_Tyr_Ser-Thr 8.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00201 - - gmx:100775565 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00201 07 1730595 1735034 Car07g00201 07 1730595 1735034 ECH