Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00199 ATGGCTAAAATATCAAAGAAGCAAATACAGAAAGACAATGCAAGCAATGATAACAATAATTTGAATGTAAGTAACACCGTAGTCACCAAGGCAAAACGGACTAGGAAAACTGTCCCTAGAAGTACTCCACCTCAACGGAGTTCAATATACAGAGGAGTCACTAGGCATCGTTGGACCGGTCGATATGAAGCTCATTTGTGGGACAAGAATTGCTGGAATGAGTCTCAGAACAAGAAAGGAAGACAAGTCTACCTTGGTGCTTATGATAATGAAGAAACGGCAGCACATGCTTATGATCTAGCAGCATTGAAATATTGGGGTCAAGAAACCATTATTAATTTTCCGTTATCAAATTATCAGAATGAACTGAAAGAAATGGATGGTCAATCAAGGGAAGAGTATATTGGATCCTTAAGGAGGAAAAGCAGTGGATTTTCTCGGGGAGTTTCTAAATACAGAGGTGTTGCAAGACATCATCATAACGGAAGATGGGAGGCTAGGATTGGCAAAGTTTTTGGCAATAAGTATCTTTATCTCGGAACCTATGCTACTCAAGAAGAAGCAGCTACAGCCTATGACATGGCAGCTATTGAATACCGTGGACTTAATGCCGTTACCAATTTCGATCTCAGTCGTTATATTAAGTGGCTTAAGCCCAACAACAATAACGATGATAATCATTTTGACGTTAACTCTAAATGTAATAGTATCAATGACCAAAACTCTAATATTGAAGAATTAGATTTGAGCTTCGTTGACAATCAAGCATCACTAAAAAATAATACTATTGATGAAGCCACGTTGGTTCAACCTCGACCAACTAGTGCCACGTCAGCTCTAGAGCTTTTGCTCCAATCATCTAAGTTTAAGGAAATGGTTGAAATGGCTTCCGTCACTAATTTGACAACAACGTTGGAGTCTGATCAATTGTCACAATGTGCATTTCCTGATGACATTCAAACATATTTTGAATATGAAGATTTCAATAGATTTGAAGGAGATCATGATAACATGTTCCACGACCTCAACTCCATTGCGCCTATGTTCAACTGTGATGACttaatttga 1068 0.382 MAKISKKQIQKDNASNDNNNLNVSNTVVTKAKRTRKTVPRSTPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDNEETAAHAYDLAALKYWGQETIINFPLSNYQNELKEMDGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGKVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNNDDNHFDVNSKCNSINDQNSNIEELDLSFVDNQASLKNNTIDEATLVQPRPTSATSALELLLQSSKFKEMVEMASVTNLTTTLESDQLSQCAFPDDIQTYFEYEDFNRFEGDHDNMFHDLNSIAPMFNCDDLI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00199 355 ProSiteProfiles AP2/ERF domain profile. 151 209 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 CDD AP2 48 117 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 SUPERFAMILY DNA-binding domain 48 117 IPR016177 GO:0003677
Car07g00199 355 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 PRINTS Ethylene responsive element binding protein signature 191 211 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 MobiDBLite consensus disorder prediction 1 48 - -
Car07g00199 355 CDD AP2 150 211 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 SMART rav1_2 151 215 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 SMART rav1_2 49 121 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 ProSiteProfiles AP2/ERF domain profile. 49 115 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 MobiDBLite consensus disorder prediction 8 32 - -
Car07g00199 355 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 338 - -
Car07g00199 355 SUPERFAMILY DNA-binding domain 150 211 IPR016177 GO:0003677
Car07g00199 355 Pfam AP2 domain 49 107 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 Pfam AP2 domain 150 201 IPR001471 GO:0003700|GO:0006355
Car07g00199 355 Gene3D AP2/ERF domain 150 211 IPR036955 GO:0003700|GO:0006355
Car07g00199 355 Gene3D AP2/ERF domain 49 117 IPR036955 GO:0003700|GO:0006355
Car07g00199 355 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00199 Car-Chr7 1700439 1703887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00199 45 213 AP2-EREBP Transcription Factor Family AT5G57390 73.373 1.15e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Car07g00199 AP2 4.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00199 K09285 - gmx:100793339 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00199 07 1700439 1703887 Car07g00199 07 1700439 1703887 ECH