Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00192 ATGTGTTTGTTTAGACTTATTACAATGTTTCTATTATTTTTTGATGTCATTGTTCATTCTAGAGTTCATATTCATAAGGAAGAACATGTTGGCCTTATGAATGATGAAAAATCACTTGTTTCATTCATGTCATGCATTATTTCGGACCCTGAAAACTCGTTAGAGAATTGGAAATCAAATGTTGTTCATGTTTGTAATTGGTCAGGTGTCAAATGCAACAATGCAAGTAATAGAATCATAGAGCTTGATCTTAGTGGAAGATCATTAGAAGGAACTATTTCCCCTGCACTTGCTAACCTCACTTTGTTGCAAATTCTTGACCTTTCTGGAAATCATTTTGTGGGTCACATTCCAAGAGAATTAGGATATTTAGTTCACCTTGAACAACTTAGTTTGTCTTGGAATTTTCTTCAAGGGAACATTCCCTTAGAATTTGGTTCACTTCACAACTTGTACTATCTTGACTTGGGAAGCAATCTTCTTGATGGAGAGATTCCTCCACAATTTTTATGTAATGTGACTTCATTGAGTTATATAGACCTCTCTAATAATTCATTAGTTGGAAGAATTCCATTGAACATTAATAAGTGTATCCTTAAAGAGCTTGAATTCCTCTTACTTTGGTCTAACAATTTTGTAGGACAAGTTCCTTTGGCTCTTTCAAATTCTACCAAACTTAAATGGCTTGATTTGGAGTCAAATATGTTGAGTGGTGAACTTCCATATGAGATTATATGTAATTGGCCACAATTACAATTCCTATACTTATCATATAATAGTTTTGTTAGCCATGATGGTAACACTAACCTTGAACCTTTCTTTTCTTCCTTGATGAATTCATCTAACTTTCAAGAACTCGAATTGGCCGGAAACAATCTTGGTGGGAAGTTGCCTCATATTATTGGTAATCTTCCAACTAGGCTTCAAAAACTTCACTTACAAGAAAATCTCATACATGGCTCTATACCTCCTCACATTGCCAACCTTGTCAACCTTACTTTCTTAAAGTTGTCTAGTAACCGAATAAACGGATCGATCCCTCCCAAACTATGCAAGATTGTTAGTCTAGAGAGAATTTATTTGTCAAACAATTCTCTATCAGGTGAGATTCCTTCAACTCTTGGAGACATTCAGCATCTTGGACTTGTTGATTTGTCAAGAAACAAGCTTTCTGGTTCGATACCGGATAGTTTCGCAAACCTCTCTCAGTTGAGAAGGCTTTTACTTTATGAAAACCATCTTTCTGGAACAATACCACCAAGTCTAGGAAAATGCGTCAATTTGGAGATTCTAGACTTGTCACACAACAACATCACAGGACTAATTCCTGCAGAAGTTGCAGCATTGACTAGCTTGAAACTATACTTGAATTTATCAAACAATGAGTTACAAGGTTCATTACCATTAGAACTGAGCAAAATGGACATGGTGCTAGCTATTGACGTATCCATGAATAATCTCTCTGGCAGAATTCCACCACAACTAGAAAACTGCATAGCACTAGAGTATCTCAATCTTTCTTATAATTCCTTAGAAGGTCCTCTACCTTATTCATTAGGCCAATTACCTTATATTCAAACACTTGATTTTTCTTCAAATCAATTGAATGGAACAATACCAGAATCCCTTCAGTTATCTTCCTATCTCAAGACACTTAACTTCTCTTTCAACAAATTATCAGGAAATGTCTCAAACAAAGGAGCATTTTCATCTTTGAACATAGACTCTTTCCTAGGAAACAATGATCTATGTGGCCAAATTAAAGGCATGAAACACTGTCATCATAATAAACACATTTACCATTTGGTTTTTTTGTTAGTTCCTGTGTTACTATTTGGCACACCTTTTCTGTGCATGTGTAGGCACTCCATAAAGCGATTGCGAGTCGTTAGCGAATGTGACTTGGAAGACGAAGAAGATGAAACAAAAGAGCTCAAGTATCCAAGAATTTCATATAAACAACTTAAAGAAGCAACTAGAGACTTCAGTGCTTCAAACATCATAGGTTCGGGTCGGTTCGGACGAGTATACAAAGGTGTCCTATTAGATAATACAAGAGTTGCAGTGAAGGTATTAGATACAACAAAAGCTTGTGAGAATGAGATATCATGGAGCTTTAGAAGGGAATGTCAAATAATTAAAAAGATAAGGCATAGAAATTTAATAAGGATCATTACAATTTGTAGCAAGACAGAATTTAAGGCTATTGTTCTTCCACTGATGCCAAATGGTAGCCTTGAGAGGAGCCTATATCCTCCAAACAATGAATTAAGTCAGAGATTAAATGTGACTCAATTTGTGAGGATTTGTAGTgatgttgctgagggaatttgttatttgcaccattactctcctgtgaaagtagtgcactgtgatcttaagcctagtaatatacttcttgaTGAAAACTTCACAGCTTTGGTTACTGATTTTGGAATTTCAAGGCTTCTAAAAGGTGATGAGAAGAATTTCAGTAATAACTCAACGTCTTTCAGTTCAACACATGGATTGTTATGTGGCTCAGTTGGCTATATAGCTCCTGAATATGGAATGGGTAAACATGCTTCAAGTGAGGGTGACGTATACAGTTTTGGAGTAATTCTGTTAGAAATAGTGACAGGTAAACGCCCTACTGATGTACTCATCCATGAGGGCTCTAGCTTGCATGAATGGGTTAAGATACAATACACACAGCCACACAAGCTTGAAAACATTGTTCAACAAGCACTTCAAAGGTGCTCTCTTTCTTGTGTTCCAAGGCATGATACTAAAATTTTGGAAGATGTTATGTTGGAACTCATTGAACTAGGGCTACTTTGCACACAGAACAACCCTTCAACAAGACCAACCATGCTGGATGTAGCACAAGAGATGGGGAGGTTGAAGGATTACCTCAATAATTCCTTCAGCAGAGAACATAATTTACTTGAAAAGTAA 2937 0.351 MCLFRLITMFLLFFDVIVHSRVHIHKEEHVGLMNDEKSLVSFMSCIISDPENSLENWKSNVVHVCNWSGVKCNNASNRIIELDLSGRSLEGTISPALANLTLLQILDLSGNHFVGHIPRELGYLVHLEQLSLSWNFLQGNIPLEFGSLHNLYYLDLGSNLLDGEIPPQFLCNVTSLSYIDLSNNSLVGRIPLNINKCILKELEFLLLWSNNFVGQVPLALSNSTKLKWLDLESNMLSGELPYEIICNWPQLQFLYLSYNSFVSHDGNTNLEPFFSSLMNSSNFQELELAGNNLGGKLPHIIGNLPTRLQKLHLQENLIHGSIPPHIANLVNLTFLKLSSNRINGSIPPKLCKIVSLERIYLSNNSLSGEIPSTLGDIQHLGLVDLSRNKLSGSIPDSFANLSQLRRLLLYENHLSGTIPPSLGKCVNLEILDLSHNNITGLIPAEVAALTSLKLYLNLSNNELQGSLPLELSKMDMVLAIDVSMNNLSGRIPPQLENCIALEYLNLSYNSLEGPLPYSLGQLPYIQTLDFSSNQLNGTIPESLQLSSYLKTLNFSFNKLSGNVSNKGAFSSLNIDSFLGNNDLCGQIKGMKHCHHNKHIYHLVFLLVPVLLFGTPFLCMCRHSIKRLRVVSECDLEDEEDETKELKYPRISYKQLKEATRDFSASNIIGSGRFGRVYKGVLLDNTRVAVKVLDTTKACENEISWSFRRECQIIKKIRHRNLIRIITICSKTEFKAIVLPLMPNGSLERSLYPPNNELSQRLNVTQFVRICSDVAEGICYLHHYSPVKVVHCDLKPSNILLDENFTALVTDFGISRLLKGDEKNFSNNSTSFSSTHGLLCGSVGYIAPEYGMGKHASSEGDVYSFGVILLEIVTGKRPTDVLIHEGSSLHEWVKIQYTQPHKLENIVQQALQRCSLSCVPRHDTKILEDVMLELIELGLLCTQNNPSTRPTMLDVAQEMGRLKDYLNNSFSREHNLLEK 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00192 978 Pfam Leucine rich repeat 355 414 IPR001611 GO:0005515
Car07g00192 978 SUPERFAMILY L domain-like 275 577 - -
Car07g00192 978 Gene3D Ribonuclease Inhibitor 33 198 IPR032675 -
Car07g00192 978 ProSiteProfiles Leucine-rich repeat profile. 427 448 IPR001611 GO:0005515
Car07g00192 978 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Car07g00192 978 Gene3D Phosphorylase Kinase; domain 1 632 739 - -
Car07g00192 978 Pfam Protein kinase domain 664 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00192 978 SMART LRR_sd22_2 223 250 - -
Car07g00192 978 SMART LRR_sd22_2 425 446 - -
Car07g00192 978 SMART LRR_sd22_2 329 358 - -
Car07g00192 978 SMART LRR_sd22_2 124 145 - -
Car07g00192 978 SMART LRR_sd22_2 280 306 - -
Car07g00192 978 SMART LRR_sd22_2 148 181 - -
Car07g00192 978 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 25 962 - -
Car07g00192 978 SUPERFAMILY Protein kinase-like (PK-like) 644 956 IPR011009 -
Car07g00192 978 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
Car07g00192 978 SMART LRR_typ_2 329 353 IPR003591 -
Car07g00192 978 SMART LRR_typ_2 449 474 IPR003591 -
Car07g00192 978 SMART LRR_typ_2 377 400 IPR003591 -
Car07g00192 978 SMART LRR_typ_2 173 197 IPR003591 -
Car07g00192 978 SMART LRR_typ_2 401 425 IPR003591 -
Car07g00192 978 SMART LRR_typ_2 426 448 IPR003591 -
Car07g00192 978 SMART LRR_typ_2 100 124 IPR003591 -
Car07g00192 978 SMART LRR_typ_2 148 172 IPR003591 -
Car07g00192 978 PANTHER OS04G0122200 PROTEIN 25 962 - -
Car07g00192 978 SUPERFAMILY RNI-like 81 367 - -
Car07g00192 978 Gene3D Ribonuclease Inhibitor 199 596 IPR032675 -
Car07g00192 978 Gene3D Transferase(Phosphotransferase) domain 1 741 976 - -
Car07g00192 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Car07g00192 978 SMART serkin_6 662 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00192 978 Pfam Leucine Rich Repeat 501 520 IPR001611 GO:0005515
Car07g00192 978 Pfam Leucine Rich Repeat 427 445 IPR001611 GO:0005515
Car07g00192 978 CDD STKc_IRAK 668 961 - -
Car07g00192 978 ProSiteProfiles Protein kinase domain profile. 662 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00192 Car-Chr7 1652234 1655598 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00192 35 963 Receptor kinase-like Gene Family AT3G47570 35.224 4.68e-158 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Car07g00192 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00192 - - lang:109346572 1427.54