Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00175 ATGTGGGTTCTAATAAGGTGTTCGGAATCAACACGATATGTGGTTGGTGACGGTGAAAATTGGAGCTGGAAGTTTCCTCTTCCATCACGAGATATACTAAGTCTGTGGGCCTCTAGTCACAACTTCCTAATAGGCGATGTTATTGCGTTTTGTTACGATAGTAGAAATGAATCGGTGCACGCAGTAAACGAGGGAGACTATAGTTCGTGTAATGTAGGGGGAAAAGGTCACCTGGTGGACCACGACGGGAATACGAAGGTGATACTTAACAAAATAGGAATGTATTATTTCATAAGTGGAAACAAGCGTCATTGCAAAGGTGGCTTAAAGCTCGCTCTGCTTGTCACTCAACCTCCAATTCCCCCGCCACCTCCCTCTGTTGCTTTCCCGCTTCCTACGCCAAAATCCTTGGTTGCTTTCCCGCCTCCTCcaccgtcacctttagcaccatcactttcagcaccggcactggcaccatcaccgtcaccAAATTCGTCAggtggtggtggtggaggtgAGTCGATGATATGCTTGGGAGTTTCAATGGCGATGATGATGATGTTCAGAGTTTGA 573 0.3927 MWVLIRCSESTRYVVGDGENWSWKFPLPSRDILSLWASSHNFLIGDVIAFCYDSRNESVHAVNEGDYSSCNVGGKGHLVDHDGNTKVILNKIGMYYFISGNKRHCKGGLKLALLVTQPPIPPPPPSVAFPLPTPKSLVAFPPPPPSPLAPSLSAPALAPSPSPNSSGGGGGGESMICLGVSMAMMMMFRV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00175 190 CDD Phytocyanin 11 115 - -
Car07g00175 190 Pfam Plastocyanin-like domain 31 108 IPR003245 GO:0009055
Car07g00175 190 ProSiteProfiles Phytocyanin domain profile. 11 117 IPR003245 GO:0009055
Car07g00175 190 MobiDBLite consensus disorder prediction 150 171 - -
Car07g00175 190 Gene3D - 8 117 IPR008972 -
Car07g00175 190 SUPERFAMILY Cupredoxins 9 116 IPR008972 -
Car07g00175 190 PANTHER EARLY NODULIN-55-2 7 187 - -
Car07g00175 190 PANTHER BLUE COPPER PROTEIN 7 187 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00175 Car-Chr7 1529109 1529764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00175 4 152 Phytocyanin Superfamily AT2G25060 36.000 8.89e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00175 - - cam:101502911 304.293