Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00169 ATGACTGAGCATCGCGGCTCCGAAGCTCTACCAGTGGGGCCCACTGAGCTTCTTCCGAAAGAAAACGATTCCAAAAGTTACGATAGAAACCaagtagaagaagaagaagaagaagaaaaagctgaagagatagaggaaCGAGTCGGTGAATCACCGCCTGCAACCGAGTCGCAGCTAGGCAATTCTAATGAACCTAATTCAGAAACCCTAATTGATTTTCCCTCTTCAATTTTGCAGAATCAAAGTTTCGATTTGAAGGTGAGCCCTAATATGCTGAATTCAGATGACAAAGTTGAAAATAAGGAAATAGTCCAGACACCTCCTGAGAAGGAAATCATGGCAAGAGAAGCAGCCCAGACACCTCCAACTCAAACTGAAAATCAGCTTCAAGTGATTGTGTGTGCAACTCCATTATCTGAACTATCGCCAAATTCAGTTACAAAATCTTTATCATCTATTCCTAGTTCAACGATTCAAATACAGAAAATGTCTACTCCGAACGTTAGTAATTTGCCTGTGCCAGAAATAGGCAAAAAAAATCCTTCTGGTGGTAAAGCCTTATCTTCTGTTTCTGTTGCAAGGACACCAGCATCTGATGGATACAACTGGCGGAAATATGGTCAGAAGCAAGTGAAGAGTCCTACTACAGGCTCTAGAAGTTATTACAGGTGTACTCAATCAAGCTGCTGTGCTAAGAAAATTGAATGCTGTGATCACTCAGGTCATGTGATAGAGACTGTTTATAAAAGTGAACACAGTCATGATCCCCCGCGGAAGACTAATTCCATTAGGGAAAATAAATTTGTGTCTTCCAACGAACCTACTACAGAGAACAGTGCTTTAGTGAAGCCTATCAAAGTTCTGAAGGATTCCACTCCATCCATATCTTCAAAAGCTCAAGAAGAAGCACCTTGCAGTTCTGACAAGAAACCGCAAAACTCATCTAATATCAATGGTAATGGTAAAGTTAGTTTGAATGAGGAACATCTACACGAGCCAGAGCCTAAACGAAGAAAGGAGAAAGGCGACATAATTCACTCTGATTCTCATGTAAAACCTGAAAAGAAACCCAAGTTTGTCATACATGCAGCAGGGGATGTGGGGATATCAGGCGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAACCCACATCCTAGAAACTACTATAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCCGTAGACAACTCAGATGCTGTAATCATAACTTACAAGGGGGTACACGATCATGACACTCCTGTGCCCAAGAAACGACATGGCCCACCAAGCGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGAGTAATTTGCAGTTGACGAAGCCGGGTTCGCCTCAAAACCAGAAAATTTCTACTCAATGGTCAGTGGACACGGAAGGAGAACTAACTGGGGAAGCCATGGACCTCGGGGGTGAGAAAGCAATAGAGTCAGCTCGAACGCTTCTGAGTATAGGTTTCGAAATTAAGCCTTGCTGA 1530 0.4255 MTEHRGSEALPVGPTELLPKENDSKSYDRNQVEEEEEEEKAEEIEERVGESPPATESQLGNSNEPNSETLIDFPSSILQNQSFDLKVSPNMLNSDDKVENKEIVQTPPEKEIMAREAAQTPPTQTENQLQVIVCATPLSELSPNSVTKSLSSIPSSTIQIQKMSTPNVSNLPVPEIGKKNPSGGKALSSVSVARTPASDGYNWRKYGQKQVKSPTTGSRSYYRCTQSSCCAKKIECCDHSGHVIETVYKSEHSHDPPRKTNSIRENKFVSSNEPTTENSALVKPIKVLKDSTPSISSKAQEEAPCSSDKKPQNSSNINGNGKVSLNEEHLHEPEPKRRKEKGDIIHSDSHVKPEKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPASMSNLQLTKPGSPQNQKISTQWSVDTEGELTGEAMDLGGEKAIESARTLLSIGFEIKPC 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00169 509 MobiDBLite consensus disorder prediction 248 352 - -
Car07g00169 509 SUPERFAMILY WRKY DNA-binding domain 194 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 MobiDBLite consensus disorder prediction 1 75 - -
Car07g00169 509 MobiDBLite consensus disorder prediction 290 323 - -
Car07g00169 509 MobiDBLite consensus disorder prediction 169 191 - -
Car07g00169 509 Gene3D WRKY domain 184 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 Gene3D WRKY domain 356 431 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 1 507 - -
Car07g00169 509 SMART WRKY_cls 370 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 SMART WRKY_cls 197 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 ProSiteProfiles WRKY domain profile. 365 430 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 MobiDBLite consensus disorder prediction 88 107 - -
Car07g00169 509 MobiDBLite consensus disorder prediction 54 75 - -
Car07g00169 509 MobiDBLite consensus disorder prediction 263 279 - -
Car07g00169 509 Coils Coil 27 47 - -
Car07g00169 509 MobiDBLite consensus disorder prediction 325 352 - -
Car07g00169 509 Pfam WRKY DNA -binding domain 199 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 Pfam WRKY DNA -binding domain 372 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 SUPERFAMILY WRKY DNA-binding domain 366 430 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00169 509 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 507 IPR044810 GO:0003700
Car07g00169 509 MobiDBLite consensus disorder prediction 248 262 - -
Car07g00169 509 ProSiteProfiles WRKY domain profile. 192 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00169 Car-Chr7 1477310 1482261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00169 87 509 WRKY Transcription Factor Family AT4G30935 51.034 4.86e-126 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g00169 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00169 - - aprc:113845981 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00169 07 1477310 1482261 Car07g00169 07 1477310 1482261 ECH