Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00164 ATGGCTATGCTCCGCAAGTTGTTCTTTCGTAAGCCTCCTGATGGTCTCCTCGAGATCTGCGAGAGAGTTTACGTTTTTGATTGCTGTTTCACAACTGAAGCTTGGAATGAAGAGAAATATAAAGTGTACATGGACGGTATAGTTGGTCAGCTTAGAGAGAATGTGCCTGATGCTTCTATTTTGGTTTTCAATTTTCGTGAGGAAGAGACTAAGAGTTTGATGGCAAATATCATATCTGAGTACGATATTACTATAATGGACTATCCTAGGCACTATGAAGGTTGCCCTGTGCTCAAAATGGAGCTCATTCACCACTTTTTAAGGTCTAGTGAAAGCTGGCTTTCACTTGGTCACCACAATGTGTTGTTAATGCATTGTGAACGTGGTGGTTGGCTGGTTTTGGCTTTCATGTTGGCTGCATTGTTGATTTATCGAAAGGTTTATTCTGGGGAACAGAGGACTTTGGATATGGTTTATCGGCAGTCGCCGAACGAGCTTTTGCATTTGTTGACGCCACTGAATCCAATCCCTTCCCAACTGAGGTATCTGCAGTATGTTTCCAGGAGGAATGTGGCCTTAGATTGGCCTCCGCTCGACAGGGCACTCATGTTGGACTGCATCATTCTCAGATTCATCCCAAACTTTGATGGGCAAGGTGGTTGTCATCCGCTGTTTAGAATCTACGGACAGGATCCTTTTAGTGCAGATAAAAGTTCTAAAATATTATACTCAACGCCGAGGAGAAGCAAAAATATCCGGGCATACAAGCAGGGGGAGTGTGAACTAATTAAAATTGATATCAATTGCCACATTCAAGGTGATGTCGTGATTGAGAGTATTAACTTGAATGATGATATGGAGCATGAAACGATGATGTTCCGAGTCATGTTCAACACAACTTTTGTTAGATCCAATATTTTGATGCTTAATTGCGATGAAATTGACGTTCTATGGGATGCTAAAGACCACTTTCCAAAAGATTTCAGAGCTGAGATCCTTTTCTCAGAGATGGATGCTGCTGCATCAGTTATTGCAGATGGTACATCATGCTTTGAGGAGAAAGAGGGACTTCCGATTGAAGCATTTGCCACGGTTCAAGAGATCTTTAACCATGTGGACTGGATGAACCCAAAGGCAGAAGCTGCGTTGAATGTGCTCCAACATATAAGTACCTCTGCTATCATGAATGACAAGTTGGATAAAGTTTCTGATCAGCATGTGGAAACTGCCTCTTCTTTGCGTGAAACAGGTTTTAAAATGCCTCAGAGGAATTCCTATGAAGCAACACAGTCTCGGTCCTCAACTAAGCAACCCCCAAATAATGATATGAGTGGAAAAGAGGATAAGACAAACAAAGTAGATGATATTCCACAGCAGGCTAATACATCAGATATCATCTGTCAGCAGACATTCTGCTCATCTGAAAGAAGATTGGATTCCAGTAAATGTGCAACAGGGTCATCAAATATTGACATAAAACTGCAGGCATCCAATCTCGATTCATCTGGTTCAGTTGACGCTTCTCTCTCCCCTGGAACACCTCCTCTGCGGCCTCCATCGACTGCTCATGCCAAAGAAGTTCAAGATTCTCCTGCTCACAAAGAATCACCTCCTCGTCATATTTTGCCTTTACATTCAGGACATCAATCAGAAGACATAAGTTATTCACCTGTTTCTAGCTCTACACCTGGGACCCAACTATTATCTGCTTTCGACAGCAAGTCACCAGCTGCCACTGTTTCCCGTCCTTCACTTTCATCAGTTTCTTCAATTCAGCCATCCTCCCTGCTTTCTTGCAGAACACCTTTGAATGGCATTCAACCTGTCAAAACAAGACTTGAGTCTTCCCCTTCACAAcctccaactccaccccctcctcctacccctccACTAAAAGATCACAAATCTTTCCCATCACAATCTCAAACTCCACCCCCTCCACTTAAAGATCACAAAGTAATTAGAGCTGGacctccaaccccacccccaccccctccctcacctcccaAGAAGGAACTACATGTTGAAGCTGGACCTCCTCCTACTTCTCCCATTCCATCTCCTATGAATGAACAGCCACATGTAAGAGATGGACTTTCTCCTCCGCCACCTCCTCTAAAAGCGGAGCAACCTGCTACGTTTAAGcccccaccacctccaccaccaccTCATCATTCAAGGGAAGTTGCTAGTCCTACTATAGCACCACCAGCACCGCCTCCACCTCCCTCTGCAACACTTTCCTCTGGCAACCCTAATCCTTCATCAAAAAAGTCTCCACCTGCTCCACCACCTCCAATTCCTTTTGCACCACCAGCACCGCCTCCACCTCCCTCTGCAACACTTTCCTCTGGCAACCCTAATCCTTCATCAAAAAAGTCTCCACCTGCTCCACCACCTCCAATTCCTTTTGGTAAAGAAGGTCTAAAACCAGGCAGTGCTTTTCCCATGTCTCTTTCTGTCAGAAGTGATGGAAATAATGTCTCGGGCACTACAGGACCTCAATCTAGTTCACCAACAGGACCAAAGGGACGAGGTCTATCACGTACGGTTGGGTCAAAGAATAACTCCAAAAAGTTGAAGCCGTTGCATTGGATGAAATTATCTAGAGCAGTGCAAGGAAGTTTGTGGGACGAGACACAAAAATCTAGTGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTCGAGAGTCTCTTCTCAGCAGCAGCCCCAAGTTCAAACACTGCCAAGAAGTCAAATGTCCAAAGCTCAGTTAGGCCTAAATCTGAGAAAGTGCAACTGGTTGAGCATAGGCGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAGGTGCCATTGCGTGATTTAATGGGCTCAGTGTTAGCACTAGAAGAGTCAGCGCTAGATACTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCTACGAAAGAGGAGATGGAAATAGTCAAGAATTATAACGGGGAAAAGGATAAATTAGGGAGATGCGAACAGTTCTTCATGGAGTTGATGAAAGTACCACGGGTAGAATCTAAGCTCAGAGTCTTTTCATTCAAGATTCAATTCCACTCTCAGATCAGGAATTCTGTCAAATTAAAGAGAATAATGCAAACAATACTTACTCTAGGAAATGCTTTGAATCAAGGAACTGCCAGGGGTTCTGCTATTGGATTCAGATTAGATAGCCTTCTTAAACTCACGGAGACACGTGCAAGGAACAACAAAATGACTCTCATGCATTATCTTTGTAAGGTGTTAGATGACAAATTACCAGAAGTTTTAGACTTCTCTAAAGATATTGCTAACCTAGAACCAGCGGCGAAGATCCAATTGAAGTTTCTGGCAGAGGAGATGCAAGCAATAAACAAAGGGTTAGAGAAAGTTGTACAAGAGTTATCCACTTCTGAAAATGATGGTCCTATATCAGAAACATTCCGCAAGAAATTGAAAGTTTTCCTCTGTTCTGCTGAAGCTGAAGTCCGCTCATTGGCTTCAATATATTCTGGTGTGGGCAGGAACGTGGATGTGTTGATTCTTTATTTTGGTGAAGATCCATCTCGCTGTACATTTGAGCAAGTTGTCACAACTTTGCTCAACTTCACTCGAATGTTCAACAAAGCCCATGAAGAAAACTGCAAGCAGCTAGAGCTTGAAATGAAGAAAACAGCAGAAAGTGAGAAAAAGAAATGTGAATCAGAAAGGATATTACCAACAGCAATCCGGACTGGCAATGTCAAATAA 3747 0.4171 MAMLRKLFFRKPPDGLLEICERVYVFDCCFTTEAWNEEKYKVYMDGIVGQLRENVPDASILVFNFREEETKSLMANIISEYDITIMDYPRHYEGCPVLKMELIHHFLRSSESWLSLGHHNVLLMHCERGGWLVLAFMLAALLIYRKVYSGEQRTLDMVYRQSPNELLHLLTPLNPIPSQLRYLQYVSRRNVALDWPPLDRALMLDCIILRFIPNFDGQGGCHPLFRIYGQDPFSADKSSKILYSTPRRSKNIRAYKQGECELIKIDINCHIQGDVVIESINLNDDMEHETMMFRVMFNTTFVRSNILMLNCDEIDVLWDAKDHFPKDFRAEILFSEMDAAASVIADGTSCFEEKEGLPIEAFATVQEIFNHVDWMNPKAEAALNVLQHISTSAIMNDKLDKVSDQHVETASSLRETGFKMPQRNSYEATQSRSSTKQPPNNDMSGKEDKTNKVDDIPQQANTSDIICQQTFCSSERRLDSSKCATGSSNIDIKLQASNLDSSGSVDASLSPGTPPLRPPSTAHAKEVQDSPAHKESPPRHILPLHSGHQSEDISYSPVSSSTPGTQLLSAFDSKSPAATVSRPSLSSVSSIQPSSLLSCRTPLNGIQPVKTRLESSPSQPPTPPPPPTPPLKDHKSFPSQSQTPPPPLKDHKVIRAGPPTPPPPPPSPPKKELHVEAGPPPTSPIPSPMNEQPHVRDGLSPPPPPLKAEQPATFKPPPPPPPPHHSREVASPTIAPPAPPPPPSATLSSGNPNPSSKKSPPAPPPPIPFAPPAPPPPPSATLSSGNPNPSSKKSPPAPPPPIPFGKEGLKPGSAFPMSLSVRSDGNNVSGTTGPQSSSPTGPKGRGLSRTVGSKNNSKKLKPLHWMKLSRAVQGSLWDETQKSSEASKAPEIDMSELESLFSAAAPSSNTAKKSNVQSSVRPKSEKVQLVEHRRAYNCEIMLSKVKVPLRDLMGSVLALEESALDTDQVENLIKFCPTKEEMEIVKNYNGEKDKLGRCEQFFMELMKVPRVESKLRVFSFKIQFHSQIRNSVKLKRIMQTILTLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLDDKLPEVLDFSKDIANLEPAAKIQLKFLAEEMQAINKGLEKVVQELSTSENDGPISETFRKKLKVFLCSAEAEVRSLASIYSGVGRNVDVLILYFGEDPSRCTFEQVVTTLLNFTRMFNKAHEENCKQLELEMKKTAESEKKKCESERILPTAIRTGNVK 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00164 1248 MobiDBLite consensus disorder prediction 527 541 - -
Car07g00164 1248 Gene3D Formin, FH2 domain 850 1217 IPR042201 -
Car07g00164 1248 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Car07g00164 1248 MobiDBLite consensus disorder prediction 500 865 - -
Car07g00164 1248 Gene3D - 199 340 - -
Car07g00164 1248 ProSiteProfiles Formin homology-2 (FH2) domain profile. 850 1232 IPR015425 -
Car07g00164 1248 MobiDBLite consensus disorder prediction 756 783 - -
Car07g00164 1248 MobiDBLite consensus disorder prediction 409 441 - -
Car07g00164 1248 MobiDBLite consensus disorder prediction 903 925 - -
Car07g00164 1248 SMART PTEN_C2_2 197 336 IPR014020 -
Car07g00164 1248 MobiDBLite consensus disorder prediction 405 460 - -
Car07g00164 1248 SUPERFAMILY Formin homology 2 domain (FH2 domain) 925 1226 - -
Car07g00164 1248 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Car07g00164 1248 MobiDBLite consensus disorder prediction 697 748 - -
Car07g00164 1248 MobiDBLite consensus disorder prediction 903 924 - -
Car07g00164 1248 MobiDBLite consensus disorder prediction 819 857 - -
Car07g00164 1248 Gene3D Protein tyrosine phosphatase superfamily 15 198 IPR029021 -
Car07g00164 1248 MobiDBLite consensus disorder prediction 617 633 - -
Car07g00164 1248 Pfam Formin Homology 2 Domain 855 1206 IPR015425 -
Car07g00164 1248 Coils Coil 1113 1133 - -
Car07g00164 1248 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Car07g00164 1248 SMART it6_source 531 1248 IPR015425 -
Car07g00164 1248 PANTHER FORMIN-J 752 1232 - -
Car07g00164 1248 PANTHER FORMIN-J 1 760 - -
Car07g00164 1248 MobiDBLite consensus disorder prediction 791 806 - -
Car07g00164 1248 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Car07g00164 1248 MobiDBLite consensus disorder prediction 549 616 - -
Car07g00164 1248 Coils Coil 1207 1227 - -
Car07g00164 1248 MobiDBLite consensus disorder prediction 656 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00164 Car-Chr7 1421022 1431114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00164 1 400 Protein tyrosine phosphatase (PTP) family AT5G58160 66.334 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00164 - - aprc:113848377 1741.09