Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00162 ATGATAGGACCTTGTTATTGGTTCACTCTAACTGAATTTTTCTGCTTCTCAAAACGCATAATCGGCGGCAGAAATTGTCACCGAAAACACGTCGAAGACGATGGAAAATACGAGCTGGGTCGAGTTCTGGGTCACGGAACATTCGCGAAGGTTTATCACGCTAAAAATTTAAACACAGGAAAAAGCGTTGCGATGAAAGTGGTTGGAAAAGAGAAAGTAATAAAAGTTGGAATGATGGAACAAATCAAAAGAGAAATATCCGTTATGAAAATGGTGAAACACCCAAACATCGTTCAACTTCATGAAGTCATGGCTTCAAAATCAAAGATCTATATAGCCATGGAACTCGTTCGTGGCGGCGAGCTTTTCAACAAAGTAGTTAAAGGCCGTCTTAAAGAAGATCTCGCTAGGGTTTATTTTCAGCAGTTAATCTCAGCCGTTGATTTCTGTCACAGTCGTGGTGTTTACCACCGCGATCTTAAACCGGAAAATCTTCTCCTCGACGAAGAAGGTAATCTCAAAGTCTCTGATTTTGGACTCTGTACTTTCTCTGAACATTTGAGACAAGATGGACTCTTGCATACTACTTGTGGTACTCCGGCGTATGTTTCCCCGGAGGTTATAGCCAAAAAAGGCTACGACGGTGCTAAAGCTGATATTTGGTCTTGTGGTGTTATTCTTTATGTTCTTCTCGCTGGTTTTTTACCTTTTCAAGATGATAATTTGGTTGCTATGTATAAGAAGATTTATAGAGGTGATTTCAAATGTCCACCTTGGTTTTCTTTGGAAGCTAGAAGGCTTATTACAAAGCTTCTAGATCCCAATCCGAATACAAGAATCACTATATCCAAGATTATGGAATCTTCTTGGTTTAAGAAACCGGTTCCCAAGAACATGGCAATTaggaggaaggagaaggaggaggaggaagagaaggGGTTTCATTTGGAGTGTGAAAATGATAAATTTAAGCAACAACCTACCACGATGAATGCTTTTCATATTATATCTTTATCGGAAGGTTTTGATTTGTCTCCATTGTTTGAGGAGAAGAAGAGGGAGGAGAGGGAGGAGATGAGGTTTGCTACGGCGGGGACTCCGAGCAGAGTGATATCCAAATTGGAACAAGTTGCCAAAGCTGTCAAGTTTGATGTCAAGAGTAGTGATATGAAGGTCAGGCTGCAAGGACAGGAAAGAGGTAGGAAAGGGAAATTGGCTATTGCCGCGGATATTTACGCCGTGACGCCGTCGTTTTTGGTGGTCGAGGTCAAGAAAGATAAAGGTGATACTTTGGAGTATAATCAGTTCTGTAGTAAAGAGCTTCGTCCTGCTTTGAAAGATATTTTCTGGACTTCTACTGAGCCACCAGCTGCTTGA 1377 0.4001 MIGPCYWFTLTEFFCFSKRIIGGRNCHRKHVEDDGKYELGRVLGHGTFAKVYHAKNLNTGKSVAMKVVGKEKVIKVGMMEQIKREISVMKMVKHPNIVQLHEVMASKSKIYIAMELVRGGELFNKVVKGRLKEDLARVYFQQLISAVDFCHSRGVYHRDLKPENLLLDEEGNLKVSDFGLCTFSEHLRQDGLLHTTCGTPAYVSPEVIAKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVAMYKKIYRGDFKCPPWFSLEARRLITKLLDPNPNTRITISKIMESSWFKKPVPKNMAIRRKEKEEEEEKGFHLECENDKFKQQPTTMNAFHIISLSEGFDLSPLFEEKKREEREEMRFATAGTPSRVISKLEQVAKAVKFDVKSSDMKVRLQGQERGRKGKLAIAADIYAVTPSFLVVEVKKDKGDTLEYNQFCSKELRPALKDIFWTSTEPPAA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00162 458 Gene3D Phosphorylase Kinase; domain 1 30 121 - -
Car07g00162 458 CDD CIPK_C 331 446 - -
Car07g00162 458 PANTHER - 35 453 - -
Car07g00162 458 ProSiteProfiles Protein kinase domain profile. 37 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00162 458 ProSitePatterns Protein kinases ATP-binding region signature. 43 70 IPR017441 GO:0005524
Car07g00162 458 SMART serkin_6 37 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00162 458 Pfam Protein kinase domain 37 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00162 458 CDD STKc_SnRK3 36 290 - -
Car07g00162 458 Gene3D Transferase(Phosphotransferase) domain 1 122 296 - -
Car07g00162 458 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 35 453 - -
Car07g00162 458 SUPERFAMILY Protein kinase-like (PK-like) 35 299 IPR011009 -
Car07g00162 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Car07g00162 458 Pfam NAF domain 327 386 IPR004041 GO:0007165
Car07g00162 458 ProSiteProfiles NAF domain profile. 325 349 IPR018451 GO:0007165
Car07g00162 458 Gene3D Kinase associated domain 1, KA1 324 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00162 Car-Chr7 1399291 1400839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00162 35 453 CBL-interacting serine-threonine protein kinases AT4G30960 75.355 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car07g00162 Pkinase 4.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00162 - K07198 gmx:100781111 703.745