Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00155 ATGTCTGTAAGAAAACCCCCATTGCCTCGTCTCCTCCTTAACAATGTCTCTTGTATGAGAAATGCCCAGCAAGTTCTGTCTAATGTGAATCTCTCTCTTCATGATGGAGGAGCACTTGTGCTAACAGGTGCAAATGGCTCAGGAAAGTCAACTTTCTTGCGCATGCTAGCTGGTTTTTCTCGTCCTTCTGCAGGCGAAATCCTTTGGAATGGCCATGACATTCAAAAATCAACAATCTTTCATCAGTATAAGCTTCAGCTTAACTGGGTCACTCTCAAAGATGCAATTACAGATAAATTTACAGTTCTGGACAATATTCAGTGGTTTGAACTTCTTGAAGGCAAGCACGGGAAGGCTATGCCTGCACTTGAGGTGATGGGACTAGGAAAATTGGCCAAGGAAAAGCCAAAGGTGCTTTCAATGGGCCAAAGGAAAAGATTGCAACTTGCCAGAATGCTCGCAATTGATCGCCCCATATGGTTACTTGATGAGCCTTCAGTTGCGTTAGATGATGAAGGTGTAAAGTTACTCGAGTACATTATTGCAGAACACAGGAAACAAGGAGGAATTGTGATTGTGGCGACTCATTTACCCATTGAGATAGAAGATTCCATGATTATGAGGCTGCCACCAAGGTTTCCAAGGAGGATGACATTTGTAGATATGCTTGACCGGATGGATATTAGTTAA 690 0.429 MSVRKPPLPRLLLNNVSCMRNAQQVLSNVNLSLHDGGALVLTGANGSGKSTFLRMLAGFSRPSAGEILWNGHDIQKSTIFHQYKLQLNWVTLKDAITDKFTVLDNIQWFELLEGKHGKAMPALEVMGLGKLAKEKPKVLSMGQRKRLQLARMLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKQGGIVIVATHLPIEIEDSMIMRLPPRFPRRMTFVDMLDRMDIS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00155 229 Gene3D - 8 208 IPR027417 -
Car07g00155 229 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 13 207 IPR005895 GO:0017004|GO:0022857
Car07g00155 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 9 223 IPR005895 GO:0017004|GO:0022857
Car07g00155 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
Car07g00155 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 228 IPR003439 GO:0005524
Car07g00155 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 203 IPR027417 -
Car07g00155 229 SMART AAA_5 35 223 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00155 Car-Chr7 1347428 1348444 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00155 24 207 Calmodulin-binding Proteins AT2G36910 25.871 4.30e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00155 - - gmx:100796586 397.127