Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00148 ATGACAGCAGAGGGCCGTTTGGTGGGTGAAGAGGTTTCCGGAGACGATTTTCCGGCCGGTATGCGTGTTCTTGCTGTTGATGACGACAAAACTTGTCTCAAATTGTTGGAGAATTTGCTTCGCAAATGCAACTATCATGTTACTACAACAACAGAGTCAGTGAAGGCGCTAGAAATGTTGAGGGAAAACAGAAATATGTTTGACCTTGTTATTAGTGATGTAAATATGCCAGACATGGATGGATTTAAGCTCCTTGAGCAAGTTGGACTTGAAATGGACCTACCTGTAATCATGCTGTCGGGAAATGGTGATAAAGAGAGGGTGATGAAAGGCGTGATACATGGCGCTTGCGACTATCTGATGAAACCTATCCGAATCGAAGAGCTGCAGAACATATGGCAACATGTAGTGAGAAAGAAGATTGATTGCAAGGATCATAATAAGGGTACAAATACTAACGAGGATAAAATCTGCAATATGGCTGGGGTGTGTAGTCAAGACATCACATCTGAAAATATTGATAACAAGAACAAAATGTTGAGACAAAAAAGGAAggaacaaagtgacgaagaagatgatgaagaagaagataatgatgaagagaatggagaggaaccctcaACTCGGAAGAAGCCTCGTTTCGTTTGGGATGCTGAGTTGCATAGAAAATTTCTTGATGCTGTTAATCAACTGGGCCTTGACAAGGCTTTTCCTAAGAAAATACTTGACTTGATGAATGTTGAAGGGCTTACAAGGGAAAATGTAGCAAGTCATCTGCAGAAATACAGACTTAGTCTCAAAAGGCCAGCTAAACAAGCTAGAATTGATGGTACATTGGGTACTACTGATCCTTACCTGCAAATGGGTTCATTAGGTGGATATGGAGATTTTTGTACCTTGTCAGGATCAAGAAGAATCTTAAGCAGCACACTACCATCATATGCATCTAGTGAAATATTTTGTCGGTCGAACGCCTCATCACTGTTGAACTCTAGAGGAATTAGTTCTTCTACACTGGTCCCTCCACTCCAGTCTCAAAACATTAATGCTCTCAAGCTGCCTATGTTTTCTGCTTACGAAAACTCGAGTTTCTTACAGCGTATTCGAGCATCAACGGAGATTAACCATTTTCAGCAGAACAATTATCCAACTGGCAATATGAAGTTAAGTCCAATTGATGATTCAAGTGCATTTGCAGTTTCATCTAGCCTCTCAGACATCATCAGAGCTACTACTATTAACAATGCAAATAGTTATCTGTCTTGCTTCTCAAGTAATCACCTACAAACACATAATTCAGGAGCATTTATGAATCACTCTTCTGTTGGAGGTGCTGCTGTGAAATCAGAATCTTTTAACCCCGGCACAAGTGGTTCCTCGAATTCATTTGATTATAGTCGGATTAAGGAAAGCTTGCAGAATGCAGCTCAGTTATCTAACTTTGCTTCCAATTCTTCTCCATTGAGTGAGGATTTTAACAATGATCAACTGTCTCAAAATAGCTTAAAGTTTTCCTCTCACGGTTCTCATTTTCAGAAAAGTCCAATTGATTTTTCTTCCTCGCGTGTTGTTGCGGTTCCTTTGGAGGAAACTATGCCATGTCAAGAAGGCTTACTTGGGAATGTCGTAAAGGCTTCATGTTACACACAGCATCAAAACATGAGTTCTACCTTCAATACCTTAAATTCTCTAGCTTCTCCTAATGAAGACACTCAGTTGCCTGAAGTTGAGAATTTATATTCAGATGCTAGAATTGAATCAAATGATGATTGCTTTTTGCAGCATATGATTTCTCTAGAAGGATTCGTTCAGAATAATTGTGTTTCATTGGATGACATAATAAGCGAAACAGTTAAAAAGGACCAAAATGAGACGAAATCGATAGACCGAGAAAAGGAATTTGATGCTTGCAAAGTTGGACCAAAATGA 1929 0.381 MTAEGRLVGEEVSGDDFPAGMRVLAVDDDKTCLKLLENLLRKCNYHVTTTTESVKALEMLRENRNMFDLVISDVNMPDMDGFKLLEQVGLEMDLPVIMLSGNGDKERVMKGVIHGACDYLMKPIRIEELQNIWQHVVRKKIDCKDHNKGTNTNEDKICNMAGVCSQDITSENIDNKNKMLRQKRKEQSDEEDDEEEDNDEENGEEPSTRKKPRFVWDAELHRKFLDAVNQLGLDKAFPKKILDLMNVEGLTRENVASHLQKYRLSLKRPAKQARIDGTLGTTDPYLQMGSLGGYGDFCTLSGSRRILSSTLPSYASSEIFCRSNASSLLNSRGISSSTLVPPLQSQNINALKLPMFSAYENSSFLQRIRASTEINHFQQNNYPTGNMKLSPIDDSSAFAVSSSLSDIIRATTINNANSYLSCFSSNHLQTHNSGAFMNHSSVGGAAVKSESFNPGTSGSSNSFDYSRIKESLQNAAQLSNFASNSSPLSEDFNNDQLSQNSLKFSSHGSHFQKSPIDFSSSRVVAVPLEETMPCQEGLLGNVVKASCYTQHQNMSSTFNTLNSLASPNEDTQLPEVENLYSDARIESNDDCFLQHMISLEGFVQNNCVSLDDIISETVKKDQNETKSIDREKEFDACKVGPK 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00148 642 CDD REC_typeB_ARR-like 23 137 - -
Car07g00148 642 MobiDBLite consensus disorder prediction 175 210 - -
Car07g00148 642 Pfam Response regulator receiver domain 23 131 IPR001789 GO:0000160
Car07g00148 642 PIRSF RR_ARR_type-B 3 635 IPR017053 GO:0003677|GO:0003700|GO:0009736
Car07g00148 642 SUPERFAMILY Homeodomain-like 208 268 IPR009057 -
Car07g00148 642 SUPERFAMILY CheY-like 20 140 IPR011006 -
Car07g00148 642 SMART REC_2 21 133 IPR001789 GO:0000160
Car07g00148 642 Coils Coil 170 204 - -
Car07g00148 642 PANTHER TWO-COMPONENT RESPONSE REGULATOR 477 610 - -
Car07g00148 642 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 475 - -
Car07g00148 642 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Car07g00148 642 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 475 IPR045279 GO:0009736
Car07g00148 642 PANTHER TWO-COMPONENT RESPONSE REGULATOR 477 610 IPR045279 GO:0009736
Car07g00148 642 Pfam Myb-like DNA-binding domain 216 263 IPR001005 -
Car07g00148 642 Gene3D - 21 205 - -
Car07g00148 642 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Car07g00148 642 Gene3D - 207 268 - -
Car07g00148 642 MobiDBLite consensus disorder prediction 620 642 - -
Car07g00148 642 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00148 Car-Chr7 1313742 1317549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00148 15 387 Response Regulator Gene Family AT2G25180 49.869 4.23e-104 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Car07g00148 Response_reg 2.1e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00148 - K14491 mtr:MTR_4g131580 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00148 07 1313742 1317549 Car07g00148 07 1313742 1317549 ECH