Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00111 ATGGGGTTGCTTCCTTCACTACCAATGTTTTTCTCTCTAATCATGTTTATTAGCTTTTGTTTTCATCTCAGTAGAGCCATAGACTGCGGTGGAAATCAAGTTCAAAATACCATCATTGTTGACCAACAAGTGGGAAAAGGAAATTTCGTAACAATTCAAAGTGCCATTAATTCTATAAAAATAAATAACAATCAGTGGATTAAAATTCACATAAATCCTGGTATATACAGAGTTTATATTACTATTGGAAGACCATGTGTCATTTTAGAAGGATCTGGTAGCAATGTTACAACTGTTAGGTGGGGTTATCACCAAAAAGTACCTAGATGGTTGGCTACATTTAGTTCATCTTCACCTAATGTGATTGTGAGTGGCATTACATTCGAGAACACATATAATTTGGAAGGAGGGTCACATCATATCAAACAAGCATTGGCAGCTGGGTTTTATGCAGATAAAGCTGCCATCTATAATTGTAGATTTTTGGGTTATCAAGACACTTTATTTGCAGCATTAGGACGCCATTACTTTAAAAATTGTTATATTCAAGGTGAAGGAGACTTCATTTTCGGATCTGGTCAATCTTATTTTGAGAATTGTTTGATGAATGCCACATCAATATTGGAAAATCAAGGGCCAGGTTTTGTGACCGCCCAACGTAGGGACTCACCAAATGATCCAAATGGTTTTGTTTTTAAAGGAGGGTCCATAGTTGGGAATGGTCAAATAAATCTTGGAAGACCTTGGGGTCCATATTCAAGAGTTATATTTTGGGGAACATACTTTTCATCTGTGGTAACTCCTGAAGGGTGGGATGCTTGGAATTACCCAGGACAAGTAAATCAACTCACGTATGCAGAAGTCAATTGTACAGGACCAGGAGCTAATACTGACTCACGCGTCTATTGGATGAAAAAATATCTCAGTGATTCCGATCTAAATCAATATTCTTTATCATCTTTTATAAATCAAGATGGTTGGCTTTCCAATTTACCACCtatatcattttag 1011 0.363 MGLLPSLPMFFSLIMFISFCFHLSRAIDCGGNQVQNTIIVDQQVGKGNFVTIQSAINSIKINNNQWIKIHINPGIYRVYITIGRPCVILEGSGSNVTTVRWGYHQKVPRWLATFSSSSPNVIVSGITFENTYNLEGGSHHIKQALAAGFYADKAAIYNCRFLGYQDTLFAALGRHYFKNCYIQGEGDFIFGSGQSYFENCLMNATSILENQGPGFVTAQRRDSPNDPNGFVFKGGSIVGNGQINLGRPWGPYSRVIFWGTYFSSVVTPEGWDAWNYPGQVNQLTYAEVNCTGPGANTDSRVYWMKKYLSDSDLNQYSLSSFINQDGWLSNLPPISF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00111 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 334 - -
Car07g00111 336 SUPERFAMILY Pectin lyase-like 34 329 IPR011050 -
Car07g00111 336 Pfam Pectinesterase 42 324 IPR000070 GO:0030599|GO:0042545
Car07g00111 336 Gene3D - 31 332 IPR012334 -
Car07g00111 336 PANTHER PECTINESTERASE 7 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00111 Car-Chr7 1033428 1034980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00111 10 279 Carbohydrate Esterase AT2G19150 42.336 2.94e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00111 - - mtr:MTR_5g088290 377.481