Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00108 ATGTTAAGATTTAATCCGATGAATACTGACAACGATACTTGTTCTTCTCCTCCTCGTGCACTATGGTCTGTTGATGGAAATCGTATTATTGTGGATGAACTCGACTTCTTCTCAGATAGAAATGATGATAAATCATCTTCTCCTGAACAATTTGATGATGTTTCCATCAAGAACCAGCTTCTTTCTGATCCTATTTCTCCTAATGTCAATACTGGTTTGCAACTCCTTATTACTAACACCGGAAGTGATGAATCAACGGTGGATGATGGATCTTCAATAATTGCTCAAGAAAAGCGTCTGAAGAATGAGGTGGAGTCATTGCAAGAGAAGCTTCGACGTAGGAATGAAGAGAACGAAAATCTGAAGGAAATGCTGAACGACGTGACCACTAACTACACAACCTTGCAAACGCGTTATGCGTCCTTAATGCAACAACTACAGAACCAACCTACGGAAAGCTCACAATATGAGGTTGTGGAAGGAAAAGCTGAGGAGAATGATTGTTTTTCGGATGAAAAAACTCGATCAAGCACAGGTCAAAACAATAATAAAGATGAAAAAGAGGGTGATCGTGAGTCATCAGAACAGCAACAAATGTGGGAGTCAAATAAGGTTAATAAATTAAGTACTTCAAATGCTACGGATCAATCAGGTGTAGAAGCGACGATGAGAAAAGCACGTGTGTCAGTACGTGCGAGATCAGAAGCCAACATGATTAGTGATGGATGTCAATGGCGCAAATATGGTCAAAAAATGGCAAAGGGAAACCCTTGTCCACGGGCATATTACAGATGCACAATGAATCCTGGTTGTCCAGTTAGAAAACAGGTGCAGCGTTGTGCTGAGGACAGAACAATACTGATAACAACATATGAAGGAGCACATAACCATGCACTTCCACCACCAGCTTTAGCTATGGCATCCACCACCTCAGCAGCTGCAACCATGTTACTATCTGGTTCAATGCCAAGTGCTGATGGTGTCATCAATCATAATTTAATAACCAGAGCTATGTTTCCAAAATGTTCACCTTCTGGAATGGCTACACTCTCAGCATCAGCACCATTTCCTACTGTCACACTAGACCTTACACAAAACAACACAGataataataataataataataatTGTCATTCCCCATTTTTTCCACCTCAAAATTGTGGTTCAGGAGGAGGACAATTACCACAGGTCATTGCACAAGCACTTTATAACCAATCAAAATTCTCTGGTCTTCAATTGTCTCAGGATTCCCAATTGCAACAACCATCACTCAGCCCTGCAGCCGCCGCAGCCATCACTGCAGATCCAAACTTTGCGGCAGCACTTGCAGCCGCTATCACTTCCATAATTGGTGCTTCTACTTCCAACAACAACAATCCTAATATCATCAATAGTGCTACATACAATAATTAA 1413 0.4091 MLRFNPMNTDNDTCSSPPRALWSVDGNRIIVDELDFFSDRNDDKSSSPEQFDDVSIKNQLLSDPISPNVNTGLQLLITNTGSDESTVDDGSSIIAQEKRLKNEVESLQEKLRRRNEENENLKEMLNDVTTNYTTLQTRYASLMQQLQNQPTESSQYEVVEGKAEENDCFSDEKTRSSTGQNNNKDEKEGDRESSEQQQMWESNKVNKLSTSNATDQSGVEATMRKARVSVRARSEANMISDGCQWRKYGQKMAKGNPCPRAYYRCTMNPGCPVRKQVQRCAEDRTILITTYEGAHNHALPPPALAMASTTSAAATMLLSGSMPSADGVINHNLITRAMFPKCSPSGMATLSASAPFPTVTLDLTQNNTDNNNNNNNCHSPFFPPQNCGSGGGQLPQVIAQALYNQSKFSGLQLSQDSQLQQPSLSPAAAAAITADPNFAAALAAAITSIIGASTSNNNNPNIINSATYNN 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00108 470 Coils Coil 94 138 - -
Car07g00108 470 PANTHER WRKY TRANSCRIPTION FACTOR 6 27 459 - -
Car07g00108 470 SMART WRKY_cls 239 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00108 470 ProSiteProfiles WRKY domain profile. 234 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00108 470 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car07g00108 470 SUPERFAMILY WRKY DNA-binding domain 232 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00108 470 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 459 IPR044810 GO:0003700
Car07g00108 470 MobiDBLite consensus disorder prediction 198 219 - -
Car07g00108 470 MobiDBLite consensus disorder prediction 146 224 - -
Car07g00108 470 Gene3D WRKY domain 224 301 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car07g00108 470 MobiDBLite consensus disorder prediction 158 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00108 Car-Chr7 993025 995510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00108 25 461 WRKY Transcription Factor Family AT1G62300 49.482 8.03e-120 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car07g00108 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00108 - - mtr:MTR_4g132430 390.578