Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00103 ATGGAAGTAGTATTTCCTAGACAAGGACAGTCAAAGCAACATGCCGATGATAAGCTGAAGTTCTCGGGATGCTCAAAAGCTTTTGGAACTTCGAAGAGAAAGGCTGAAGAAACTTATAAGTCTGGTGATGAGAAAGCAGAACCAGAAGGGAAAGAAGAACAGTCGAATCAGGATACTAACATTAAGCCGGCCAAAATCCCAAGATGTTCAAAAGCTTTTGGAATTTCAAATAAGAGAAGATTTCAAGAATGTCACAGACATCATCATGATACAAATTCAAAAGTGAAAAAAAAGATTGTGGAATGTTCAGAGGAGACACCCAATCTGCCATCTAAGAAACGATATGAGCCAAAGAAGCTTGCTGCCTCAAACAAAAAATGGGAACTTGAAGATGATCTCTTTATGGATGATTTTGAACAAGATGACGAAATTCTTTTTCTTCTCAAGACAAAGAACAGGGGCAGAGCTAGTAAAATCGATAATGTAATGGATGTTCAACAAAATACCCGGAAATGTCACCAGTGCACGAAAAAGGAAAGAACAGCTTTTTTGCCTTGTACTAAATGTTCAAAAATGTACTGTATGCGATGCATTAATCAATGGTACCCTGATATGTCAATAGAAGAAGTTGCTGAAAGTTGCCCATTTTGCCGTAAAAATTGCAATTGCAATGTTTGCTTGCGTTCGAAAGGAACAATTAAGACATCTAACATGGGGATCACCAATTACGAAAAAGCTCAGTATCTGCAATACATGATTAACTTACTCCTTCCATATATGAAACAAATCTGTCATGAACAAAGTCAAGAGGAAGGTATTGAAGCTAAATTACAAGGAAAATCTTCTTCGGATATGGAGATACCACAAAGTCTTTGTGGTGACAATGAACGTGTCTATTGTGATTATTGTGCCACTTCAATTATTGATCTTCATCGAAGCTGCCCCAAGTGTTCCTATGAGCTTTGCCTTAGATGTTGCCAAGAAATACGCGATGGAAGCATTACACCCCGAGCTGAGATGAAGTTCCAATATGTGAATAGGGGCTATGATTATATGCATGGTGGTGACCCTCTACCAGCGTCTTGTGATCTAGAGACTTTGGATGGTCATCTTGAAATATCTACCAAGTGGAATGCCAAGAGTGATGGAAGTGTTAGTTGTGCACCAAAGGAGATGGGGGGTTGTGGTAGTTCTGTGTTGGAGCTGAGGCGCATCCTCCCACATGGGTGGATGAAGAAATCCTTTACAGAAGGCACAAATGACAATAACATATACTGTTCAGAGTCAAGAGACTTTTTAAAAGAAGGGATGTTGCTCTTCCAAAAACATTGGTGTAATGGCGAACCTATTATAGTTCGTGATGTTCTCAAACAAGGGACAGGTCTGAGCTGGGAGCCAATGGTCATGTGGCGAGCATTGTGTGAAAATATGGCTTCAGATATCAGTTCAAAAATGACAGAAGTGAAGGCCATCGATTGCATGGCCAATTGCGAGGTAGCAATTAATACTCGTAAGTTCTTTAAAGGTTATATAGAGGGAAGAACATATGGAAATCTGTGGCCAGAGATGCTCAAGCTAAAAGATTGGCCCCCCTCTGATAAATTTGAAGATCTTTTGCCCCGTCATTGTGATGAATTTATTCGATCCTTGCCATTTCAACAGTATACTGATCCTCGGGCTGGAATTCTCAATCTGGCTGTAAAGTTGCCAGCCCATGTCCTAAAACCTGACATGGGTCCAAAAACATATATTGCTTATGGGATTAGAGAAGAACTTGGTAGGGGAGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGACCCATACAGAGGAGGTATTATTAACTGCTGAGCAGCATTCTACTATTTCCAAATTGAAAGAAGCACACAAGGCACAAGATGAGAGCGAAAATGGTGCTCCAGAGAGGGTTGCTATATGCCTAAATGGCCGACCTTGCAACAACAGCGAACACATAGAAAATAAGGAAATATTAGAATGCAAAGATATGGATAACCGTCCTATTGAAATCAGTGGAAATATCTTTCAAAATGATGTGTCTGAGGAGGCCATCTTTCCTGATAATTGTACAGAAAATGAAACAAAGGTAACAGGTAGTGCTCTGTGGGATATTTTTCGGAGAGAAGATACTGAAAAGTTAGGAGCATATCTAAGAAAACACTCTAAAGAATTCAGGCATACTTATTGTTCACGGGTTAAACAGGTTGTACATCCAATTCATGACCAGTGTTTTTATTTGAATTTGGAGCACAAAAAGAAGTTGAAGGAGGAGTTTGGTGTAGAGCCGTGGACTTTTGAGCAAAAACTTGGGGAGGCAGTATTTATTCCTGCCGGATGCCCGCATCAAGTCAGGAATCTCAAGTCATGCACAAAAGTTGCTGTAGACTTTGTATCCCCCGAAAATGTCCATGAGTGTCTTCGTTTGACTGAAGAATTTCGTCAGCTCCCAAAGAACCACAAAGCTAGAGAAGATAAACTTGAGATAAAGAAGATGATAGTTTATGCGGTTGATCAAGCTGTCAAAGACCTAAAAGCTTTACTCAATTGTGCTTGA 2589 0.3998 MEVVFPRQGQSKQHADDKLKFSGCSKAFGTSKRKAEETYKSGDEKAEPEGKEEQSNQDTNIKPAKIPRCSKAFGISNKRRFQECHRHHHDTNSKVKKKIVECSEETPNLPSKKRYEPKKLAASNKKWELEDDLFMDDFEQDDEILFLLKTKNRGRASKIDNVMDVQQNTRKCHQCTKKERTAFLPCTKCSKMYCMRCINQWYPDMSIEEVAESCPFCRKNCNCNVCLRSKGTIKTSNMGITNYEKAQYLQYMINLLLPYMKQICHEQSQEEGIEAKLQGKSSSDMEIPQSLCGDNERVYCDYCATSIIDLHRSCPKCSYELCLRCCQEIRDGSITPRAEMKFQYVNRGYDYMHGGDPLPASCDLETLDGHLEISTKWNAKSDGSVSCAPKEMGGCGSSVLELRRILPHGWMKKSFTEGTNDNNIYCSESRDFLKEGMLLFQKHWCNGEPIIVRDVLKQGTGLSWEPMVMWRALCENMASDISSKMTEVKAIDCMANCEVAINTRKFFKGYIEGRTYGNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQQYTDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIREELGRGDSVTKLHCDMSDAVNILTHTEEVLLTAEQHSTISKLKEAHKAQDESENGAPERVAICLNGRPCNNSEHIENKEILECKDMDNRPIEISGNIFQNDVSEEAIFPDNCTENETKVTGSALWDIFRREDTEKLGAYLRKHSKEFRHTYCSRVKQVVHPIHDQCFYLNLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTEEFRQLPKNHKAREDKLEIKKMIVYAVDQAVKDLKALLNCA 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00103 862 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 412 861 - -
Car07g00103 862 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 30 412 IPR045109 GO:0032454|GO:0033169
Car07g00103 862 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 30 412 - -
Car07g00103 862 CDD cupin_RmlC-like 749 809 - -
Car07g00103 862 ProSiteProfiles Zinc finger RING-type profile. 172 218 IPR001841 -
Car07g00103 862 Gene3D Cupin 421 834 - -
Car07g00103 862 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 167 238 IPR018866 -
Car07g00103 862 Pfam JmjC domain, hydroxylase 704 808 IPR003347 -
Car07g00103 862 SMART cupin_9 539 825 IPR003347 -
Car07g00103 862 MobiDBLite consensus disorder prediction 30 58 - -
Car07g00103 862 MobiDBLite consensus disorder prediction 1 64 - -
Car07g00103 862 ProSiteProfiles JmjC domain profile. 558 825 IPR003347 -
Car07g00103 862 SUPERFAMILY Clavaminate synthase-like 439 859 - -
Car07g00103 862 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 412 861 IPR045109 GO:0032454|GO:0033169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00103 Car-Chr7 956422 962198 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Car07g00103 JmjC 1.1e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00103 K15601 K21989 gmx:100797860 1243.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00103 07 956422 962198 Car01g00687 01 5708542 5713469 PCT