Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00096 ATGGGGAGATCAGGGGGTAGAAAAAAGAAGAGTGGTTCTGTTGACAATTCGGCTTCTTCTGCTCAAACGGTGAATGGTGGTGTGGAATTGGATTCTTCAATTTTTTTGAAAAAGGCACATGAAATGAAAGAAGAAGGGAATAAGAGATTTCAGAATAAGGATTATGCTGGTGCTCTTCAACACTATGAGAATGCTCTTCGTTTGACACCCAAAACGCATCTTGATAGGGCTGTTTTTCACAGCAATAGGGCTGCTTGTTTGATGCAAATGAAACCAATTGATTATGAATCTGTGATTTCTGAGTGTACTTTGGCACTTCAGGTTCAGCCGCAATATGTCCGGGCTCTACTTCGTAGAGCCCGGGCCTATGAGGCTGTTGGTAAGTATGAGATGGCTGTGCAGGATGTGCAGTCTTTATTGACTGCTGATCCCAATCATAGGGATGCTTTGGAGATTGCTCAGAGATTGAGAACTGCGTTTGGACCTCGTCAGGAAGCGCAGCAGGATCTTCACAGTCGTCCTTCCCCTGCTGCGCTTGGGGCTTCTGCTGTCCGTGGTGCACCGATTGCTGGATTAGGCCCGTGTTTGCCTGCACGGCCATCTTCGAAGAAGGGAGCAAATCCTGCTGTTGGGTCAGTTGTCTCTCCTAATAGCAAGGTAGACAAGTCTCAACATGTTTTACTTCCAACTGAAAATGGTCCTGAGACCAAGACCCAGTTGCCTAAAGTAGCACTGAAGCCTTCTAATGGTACTGTGAAGCAACCTAACTCGAAAAATGAAAACCAGAAGGAACAGTTGTCTTATTCATCGGCTATTCACGGAAAGCTGTCGGAGGTCGCGATTCGGTGGAGATCATTGAAGCTTGTTTATGATCATGACATTAGGCTTGCCCAGATGCCGGTGAACTGCAGTTTTAGAGTACTGAGAGACGTGGTAAGCAAAAGATTTCCTTCATCAAATTCAGTTCTGATCAAGTACAAGGATTGTGATGGTGATTTGGTTACTATAACTTCTACCGATGAACTCAGATTGGCAGAGTCTTTTGTTGATAATTATCTGCTGAAAGAACCTGAATTGGGTAAAAGTGATTCCATTTCGGTGCTGAGACTTCATATTGTTGAAGTTAGTCCAGAGCAGGAGCCACCTTTGTTGGAAGAAGAGGAAGAAAAACTTGTTGAGAATGAAGCGACCAAGGAAGATGAGAGTAGATCTCATTCTTCCCTTGGTGAACCTGTCACTGAAGTTCATGAAGTTCCTGATACCGAGGTTGATAAGTTAAGTAAGGATGCTTCAAAGGAAAAGCCAGGAGCCACAGGAGATAATGAATGCAAAGAAGTGGAGATGGATGATTGGTTGTTCGAATTTGCTCAACTTTTCCGCTCACATGTTGGTATTGACCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCCGAGGCACTTGAAGAAACAGTTACTAGTGAGGAGGCTCAGGATCTATTTGACAAGGCTGCTTCAAAGTTCCAGGAGGTGGCAGCTTTGGCATTCTTCAATTGGGGCAATGTTCACATGTGTGCTGCTAGGAAGCGGATTCCCTTAGACGAGTCTGCTGGGAAAGAGGTAGTGGCAGAACAGCTTCAAGTGGCTTATGACTGGGTCAAGGAAAAGTATTCTTTGGCAAGAGAGAAGTACGAAGAAGCACTCTTGATCAAACCAGATTTCTACGAAGGACTGTTGGCGTTGGGCCAGCAACAATTTGAAATGGCCAAGCTACATTGGTCTTTTGCACTTGCTAAGAAGATAGATTTATCAGGTTGGGATCCAACAGAAACTCTTCAACTGTTCAACAGTGCAGAGGAGAAGATGAAAGCTGCAACAGAAATGTGGGAGAAGTTGGAGGAACAGAGAGCAAAAGAGCTAAAGGACCCAACTGCAACCAAGAAAGAAGAACTATTGAGAAGAAGAAAGAAACAGGGAAGTGCTACTGAAGGAGAGTCTTCTAGTGCTGGTGGTCAGGGTGATATATCTGCTGAAGAAGCTGCTGAGCAAGCAGTGGTCATGAGATCACAGATTCATCTCTTCTGGGGCAACATGCTTTTTGAAAAATCCCAAGTTGAATGCAAATTAGGAATGGATGGTTGGAAGAAAAACCTGGATGCTGCAACAGAACGCTTTAAGCTTGCAGGAGCTTCTGAGGCAGATATTTCGATGGTTCTAAAGAATCATTGCTCAAATGGAGATGCAAAAGGTGATGATAAAAAGGTCCAGAGCCCACATCCCAACAAAACCGGTGAAGGCGAACTAGAGATCAATAAGGACAATCAAACATGGTTAATGTTTGAAGTGTCAGTTATATACTGGGAACCCTTTGGCAGGAGGTATAAAGCAAAACGCTCAAAGAAGATTCTTGTCAGTATGAATGTCTTTCACGTTTCAGCCTATATCCATTTGATTACGTGCCATGTTGGTGTTTCCAGTGAAAACAAATTGGACGCATGTTGA 2493 0.4404 MGRSGGRKKKSGSVDNSASSAQTVNGGVELDSSIFLKKAHEMKEEGNKRFQNKDYAGALQHYENALRLTPKTHLDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPQYVRALLRRARAYEAVGKYEMAVQDVQSLLTADPNHRDALEIAQRLRTAFGPRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPSSKKGANPAVGSVVSPNSKVDKSQHVLLPTENGPETKTQLPKVALKPSNGTVKQPNSKNENQKEQLSYSSAIHGKLSEVAIRWRSLKLVYDHDIRLAQMPVNCSFRVLRDVVSKRFPSSNSVLIKYKDCDGDLVTITSTDELRLAESFVDNYLLKEPELGKSDSISVLRLHIVEVSPEQEPPLLEEEEEKLVENEATKEDESRSHSSLGEPVTEVHEVPDTEVDKLSKDASKEKPGATGDNECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVAEQLQVAYDWVKEKYSLAREKYEEALLIKPDFYEGLLALGQQQFEMAKLHWSFALAKKIDLSGWDPTETLQLFNSAEEKMKAATEMWEKLEEQRAKELKDPTATKKEELLRRRKKQGSATEGESSSAGGQGDISAEEAAEQAVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASEADISMVLKNHCSNGDAKGDDKKVQSPHPNKTGEGELEINKDNQTWLMFEVSVIYWEPFGRRYKAKRSKKILVSMNVFHVSAYIHLITCHVGVSSENKLDAC 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00096 830 Coils Coil 612 632 - -
Car07g00096 830 MobiDBLite consensus disorder prediction 195 266 - -
Car07g00096 830 SUPERFAMILY TPR-like 492 588 IPR011990 GO:0005515
Car07g00096 830 MobiDBLite consensus disorder prediction 631 673 - -
Car07g00096 830 PANTHER - 1 755 - -
Car07g00096 830 MobiDBLite consensus disorder prediction 631 658 - -
Car07g00096 830 ProSiteProfiles TPR repeat profile. 113 146 IPR019734 GO:0005515
Car07g00096 830 MobiDBLite consensus disorder prediction 379 442 - -
Car07g00096 830 MobiDBLite consensus disorder prediction 1 22 - -
Car07g00096 830 SMART PB1_new 283 375 IPR000270 GO:0005515
Car07g00096 830 MobiDBLite consensus disorder prediction 743 765 - -
Car07g00096 830 Gene3D Tetratricopeptide repeat domain 36 161 IPR011990 GO:0005515
Car07g00096 830 CDD PB1 286 372 - -
Car07g00096 830 Pfam PB1 domain 283 374 IPR000270 GO:0005515
Car07g00096 830 PANTHER PROTEIN CLMP1 1 755 IPR044517 -
Car07g00096 830 SMART tpr_5 77 112 IPR019734 GO:0005515
Car07g00096 830 SMART tpr_5 113 146 IPR019734 GO:0005515
Car07g00096 830 SMART tpr_5 39 72 IPR019734 GO:0005515
Car07g00096 830 MobiDBLite consensus disorder prediction 415 442 - -
Car07g00096 830 SUPERFAMILY TPR-like 36 170 IPR011990 GO:0005515
Car07g00096 830 ProSiteProfiles TPR repeat profile. 39 72 IPR019734 GO:0005515
Car07g00096 830 MobiDBLite consensus disorder prediction 211 266 - -
Car07g00096 830 Coils Coil 384 404 - -
Car07g00096 830 SUPERFAMILY CAD & PB1 domains 282 347 - -
Car07g00096 830 MobiDBLite consensus disorder prediction 380 394 - -
Car07g00096 830 Gene3D - 284 353 - -
Car07g00096 830 ProSiteProfiles PB1 domain profile. 283 375 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00096 Car-Chr7 885214 888604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00096 36 157 Calmodulin-binding Proteins AT3G25230 30.075 6.09e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00096 - - gmx:100786963 1202.58