Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00095 ATGAAACTCGACAATTCCAACGGCCAGGTGTCATTTACCGCAGAAGTTTCTCCGCCGCATAACTCCGACGACGCCGATGAGGTATTTGTGCCGCCGTTGAACTTCGCGATGGTTGATAATGGCATTTTCAGATGTTTGTGCCCTGAACCCTATCCAGAAACTACTGCGGAGTTTTTGAAATCTAACGGAATTAGGCTTTATCAATTCGGTATTGATGGTTGTAAGGAACCCTTTGTCAACATCCCAAATGATAAGATCCAAGAAGCTTTGAAAGTAGTGCTCGATGTTAGGAACCACCCCCTGCTGATTCATTGTAAACGAGGGAAGCACCGCACTGGTTGTCTTGTGGGATGCATAAGAAGATTGCAGAGATGGTGTCTATCATCTATTTTTGATGAATACCAAAGGTTTGCAGGTGCCAAAGCCAGAGTGTCAGACCAGAGGTTCATTGAATTGTTTGATATTTCAGGTTTGAAGTACAACCCACTGGCATTTTCATGCTCAAGGAAATAG 513 0.4405 MKLDNSNGQVSFTAEVSPPHNSDDADEVFVPPLNFAMVDNGIFRCLCPEPYPETTAEFLKSNGIRLYQFGIDGCKEPFVNIPNDKIQEALKVVLDVRNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAGAKARVSDQRFIELFDISGLKYNPLAFSCSRK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00095 170 Gene3D Protein tyrosine phosphatase superfamily 28 157 IPR029021 -
Car07g00095 170 Pfam Tyrosine phosphatase family 46 157 IPR004861 -
Car07g00095 170 ProSitePatterns Tyrosine specific protein phosphatases active site. 103 113 IPR016130 GO:0016311|GO:0016791
Car07g00095 170 PANTHER TYROSINE-PROTEIN PHOSPHATASE 16 169 - -
Car07g00095 170 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 155 IPR029021 -
Car07g00095 170 PRINTS Plant and fungal dual specificity phosphatase signature 45 58 IPR020428 GO:0016791
Car07g00095 170 PRINTS Plant and fungal dual specificity phosphatase signature 64 78 IPR020428 GO:0016791
Car07g00095 170 PRINTS Plant and fungal dual specificity phosphatase signature 81 95 IPR020428 GO:0016791
Car07g00095 170 PANTHER - 16 169 - -
Car07g00095 170 MobiDBLite consensus disorder prediction 1 23 - -
Car07g00095 170 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00095 Car-Chr7 880245 883656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00095 1 170 Protein tyrosine phosphatase (PTP) family AT4G03960 59.686 9.46e-82 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00095 K18045 - gmx:100785520 299.671