Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00093 ATGAACTTTGCTAGAGCTTCAATGGCAGGCTCATGTTTCACCAAGCTTCGACTTCGAAGGTCTAAGAATAAACCTTTACCAGAGCCTTCTTCTTCATCTTCAAAGACTCGGTTGAATTGTGACGCAGACAACATGGAAAGAAAAAGATTTGATAGCTTAGAATCATGGTCAATGATATTAGACTCTGAGAATGTGGAAACATGGGAAGCTTCGAAGGAGGATCAAGAAGAATGGACTGCTGATCTTTCTCAGCTTTTCATAGGTAACAAGTTTGCATCAGGAGCTCACAGTAGAATTTACCGTGGAATTTACAAGCAGAGAGCTGTTGCTGTTAAAATGGTTAGGATTCCTACTCAGAATGAAGAGAGAAGAACATTGCTTGAACAGCAATTCAAATCTGAAGTTGCTTTACTTTCACGTCTCTTTCATCCTAACATCGTTCAGTTTATTGCAGCATGTAAAAAACCACCTGTGTACTGCATCATAACAGAATACATGTCACAAGGAACTTTGAGGATGTATCTGAACAAGAAAGAGCCTTATTCACTTTCAATAGAAACTATACTAAGGTTAGCACTTGACATATCAAGGGGTATGGAATACCTTCATTCTCAAGGTGTGATTCACAGAGACCTCAAATCAAATAATTTGCTTCTCAATGATGAGATGAGGGTTAAGGTAGCGGATTTCGGGACATCGTGTCTTGAAACACGATGCCGCGAAACCAAAGGAAACATGGGAACTTATCGTTGGATGGCGCCGGAGATGATTAAGGAAaaaccttatgctcgtaaagttgatgtttatagttttggaattgtgctttgggaactCACTACAGCTCTGCTTCCCTTTCAAGGAATGACTCCAGTGCAAGCTGCTTTTGCTGTTGCTGAGAAGAATGAAAGGCCTCCATTGCCAGCTAGTTGTCAGCCAGCACTAGCACATCTGATAAAACGATGTTGGTCAGCAAATCCTTCAAAGAGGCCAGATTTCAGTGACATTGTGTCTACTCTTGAGAGGTATGATGAATGTGTGAAAGAAGGTCTTCCTCTTACTCATCATTCAGGACTTGTCACCAAAAACTTCATTATTGAACGCTTAAAAGGATGTGTCTCTATGAGTTCCTCCATACCTGTACATGCTTAA 1149 0.389 MNFARASMAGSCFTKLRLRRSKNKPLPEPSSSSSKTRLNCDADNMERKRFDSLESWSMILDSENVETWEASKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPTQNEERRTLLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMGTYRWMAPEMIKEKPYARKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVSTLERYDECVKEGLPLTHHSGLVTKNFIIERLKGCVSMSSSIPVHA 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00093 382 SUPERFAMILY Protein kinase-like (PK-like) 63 339 IPR011009 -
Car07g00093 382 ProSiteProfiles Protein kinase domain profile. 85 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00093 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Car07g00093 382 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 370 - -
Car07g00093 382 SMART serkin_6 85 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car07g00093 382 CDD STKc_MAP3K-like 92 339 - -
Car07g00093 382 Gene3D Transferase(Phosphotransferase) domain 1 168 354 - -
Car07g00093 382 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 16 370 - -
Car07g00093 382 PRINTS Tyrosine kinase catalytic domain signature 163 176 IPR001245 GO:0004672|GO:0006468
Car07g00093 382 PRINTS Tyrosine kinase catalytic domain signature 201 219 IPR001245 GO:0004672|GO:0006468
Car07g00093 382 PRINTS Tyrosine kinase catalytic domain signature 247 257 IPR001245 GO:0004672|GO:0006468
Car07g00093 382 PRINTS Tyrosine kinase catalytic domain signature 266 288 IPR001245 GO:0004672|GO:0006468
Car07g00093 382 PRINTS Tyrosine kinase catalytic domain signature 310 332 IPR001245 GO:0004672|GO:0006468
Car07g00093 382 Pfam Protein tyrosine and serine/threonine kinase 87 339 IPR001245 GO:0004672|GO:0006468
Car07g00093 382 Gene3D Phosphorylase Kinase; domain 1 74 167 - -
Car07g00093 382 MobiDBLite consensus disorder prediction 25 39 - -
Car07g00093 382 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00093 Car-Chr7 860857 864179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00093 8 382 MAP Kinase Kinase Kinase AT1G62400 82.821 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car07g00093 PK_Tyr_Ser-Thr 6.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00093 - - gmx:100799437 708.753