Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00071 ATGCAAACGTCTCAACAAAAATCAAATTCAGCTGCTATCCATTTCTATCACCGACCTGCACAGGACAATTGCCTACAAAACAATCTATGTGGCGATAAACATGGTAGCAGCAGCCAGGGAACACCTCTTTCTTTCGAAACCTTCGATGAACAATGCTTCACCCTGGAATCATACCCAGAAATTACTGGTTTCATAGATTGTGATTCCCCTTCCTATGCCAGCGTATCTTCTAACAAGAGTCCATTTTCTCCACAAGATTCTCAGCCATGCTATTCAGATCACCACCAGTCATCTTACAACACCAATGGATCGCCGACAAGCGGGTTGTCCAGTGTTGACGATGGGAATGATTTGAAGCACAAACTTAGAGAACTGGAAATGTCATTGTTGGGGCCTGATGATTTAGATATTGTTGACAGTTATGGCAGCTACATGGAGGCTAGTTTCCACGGAGCACCTCCATCGGCTAAATACAATTGGGATCTGATTGTAGAAAACATTCCGAGGCTCGACTTGAAAGAAGTCCTCTTGCTATGTGCACAGGCTGTTTCTGACGGTGATATTTCAACAGCAAGAGGCTGGATGGATAATGTATTGGTGAAGATGGTTTCGGTTGGCGGAGATCCAATCCAGAGGTTGGGTGCTTACTTGTTGGAAGGGCTTAGAGCAAGGTTGGAATCGTCAGGGAGCTTGATATACAAGGCCTTGAAATGCGAACAACCGACAAGCAAAGAGCTAATGAGTTACATGCACGTCTTGTATCAGATTTGTCCATATTTTAAGTTTGCATACTTATCTGCAAATGCTGTAATTGCAGAAGCAATGGCAAATGAATCCAGGATTCATATAATTGATTTCCAAATTGCACAGGGCACACAGTGGCATTTACTTATTCAAGCTCTTGCAAACAGGCCCGGTGGACCCCCTTTCATTCGAATAACAGGTGTCGATGATTCCCAATCATTTCACGCTCGTGGTGGAGGACTTCAGATTGTAGGAGAACGGCTATCAGAATTTGCCAGGTCTTGCGGAGTTCCATTTGAGTTCAATTATGCTGCAATGTCTGGTTGTGAAGTTCAACAGCAAAATCTTAGTGTTAGACCTGGTGAAGCCCTTGCTGTAAACTTTCCCTATATTTTGCACCACATGCCAGATGAGAGTGTGAGCATAGAGAATCATAGAGACAGATTGTTGAGGTTGGTTAAGAGTTTGTCTCCAAAGGTTGTCACCCTTGTAGAGCAAGAATCCAACACAAATACTTCTCCTTTCTTTCACAGGTTTGTAGAGACAATGGATTACTATACAGCTATGTTTGAATCAATAGACGTGGCTTCCCTAAAAGACGATAAGAAGAGGATTAGTGCAGAGCAGAACTGCGTGGCACGCGACATCGTCAACATGATAGCATGTGAGGGGGTTGAGAGGGTGGAGAGGCATGAAGTTTTTGGAAAGTGGAGGATGAGATTTTCCATGGCTGGATTTAGACAATGCGCGTTGAGTTCTTCAGTGATGGATTCTGCGCAAAATCTTTTGAAGGACTTCAATCAAAACTATAGACTTGAACATAAAGACGGTGCTCTATGTCTTGGTTGGATGAAGAGAGCTATGGCCACCTTTTCTGCTTGGCAGTGA 1632 0.4363 MQTSQQKSNSAAIHFYHRPAQDNCLQNNLCGDKHGSSSQGTPLSFETFDEQCFTLESYPEITGFIDCDSPSYASVSSNKSPFSPQDSQPCYSDHHQSSYNTNGSPTSGLSSVDDGNDLKHKLRELEMSLLGPDDLDIVDSYGSYMEASFHGAPPSAKYNWDLIVENIPRLDLKEVLLLCAQAVSDGDISTARGWMDNVLVKMVSVGGDPIQRLGAYLLEGLRARLESSGSLIYKALKCEQPTSKELMSYMHVLYQICPYFKFAYLSANAVIAEAMANESRIHIIDFQIAQGTQWHLLIQALANRPGGPPFIRITGVDDSQSFHARGGGLQIVGERLSEFARSCGVPFEFNYAAMSGCEVQQQNLSVRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVASLKDDKKRISAEQNCVARDIVNMIACEGVERVERHEVFGKWRMRFSMAGFRQCALSSSVMDSAQNLLKDFNQNYRLEHKDGALCLGWMKRAMATFSAWQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00071 543 MobiDBLite consensus disorder prediction 76 113 - -
Car07g00071 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 543 IPR005202 -
Car07g00071 543 MobiDBLite consensus disorder prediction 76 115 - -
Car07g00071 543 Pfam GRAS domain family 172 543 IPR005202 -
Car07g00071 543 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 23 543 - -
Car07g00071 543 ProSiteProfiles GRAS family profile. 163 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00071 Car-Chr7 713315 716683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00071 1 543 GRAS Transcription Factor Family AT4G17230 58.608 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car07g00071 GRAS 1.4e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00071 - - gmx:100776109 831.247
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g00071 07 713315 716683 Car01g00735 01 6265735 6270613 PCT