Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00061 ATGGGCAGTGATGAGGCTCAACAGTTATTGCTTTCAGAGTCAAGGGATCACTCTCAAATCATCAATGAGAAGAGTGACCTTCAGAGAAGAAGACCGCGACGCGGCGGTGCTTCAGAGACAGAGATCAATCTTCAAGAGCAGAATGGTGCTCAAAACCCTTTACATGATCAATGTATGACTGAAAAACAAGAAGCAGAATTCCATTTCAGGCCAGTTTTCTTATATTTAGCAGCTTACTTAGGAACAGGCACCTTATGTTTCTTTCTCACAAGTTACCAAATTGAGGGTATAAAAACCAATGGATTTCTTGATGCCCTTTATTTCTGTGTTGTGACAATGACAACTGTTGGATATGGTGATCTTGTTCCTAATAGCCCTTTAGCGAAACTACTTGCTTGCATTTATGTCTTCACTGGCATAGCTCTCGGTGGCTTAATTCTTAGCAAAGCAGCAGATTACATTGTTGAAAAACAGGAAATATTTATTGTTGAAGCCATATGCAAGGCTGAAAATTTTGGTGTAGAAGAGATTGCTGAAGAACTTGGAACTAACAAAAGCAAATACAAATTTGTGCTTGCAGCATCCACTTTTTGTGTCCACATGATTGTAGGAACTGTTTTTCTGTGTTTTGTTGAAAATCTAGATTTTGTGGATGCACTCTATTGTGTTTGTTCCACAGTCACTACTTTAGGTTATGGAGATAAGAGCTTCTCAACTACTATTGGTCGAACTTTTGCTGTGTTTTGGATATTGAGCAGCACCATTTGCTTGGCTCAGTCTTTTGCTTACCTTGCTGAACTCTATACTGACGATAGACAAAGATCACTTGCGAAAATGGTTCTTACCCGAAAACTTTCGCCCCTTGATCTTGAGGCAGCAGATCTTGATGGAGACAAAGCTGTCAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATTAACCAAGAAGATATTTCAGCTGTGATGGAGATTTTTAGAAAACTAGATTGTGATCACTCAGGAACTCTGACTGAATCCGATATCAGAAATTCTGAATTCTGA 1053 0.3932 MGSDEAQQLLLSESRDHSQIINEKSDLQRRRPRRGGASETEINLQEQNGAQNPLHDQCMTEKQEAEFHFRPVFLYLAAYLGTGTLCFFLTSYQIEGIKTNGFLDALYFCVVTMTTVGYGDLVPNSPLAKLLACIYVFTGIALGGLILSKAADYIVEKQEIFIVEAICKAENFGVEEIAEELGTNKSKYKFVLAASTFCVHMIVGTVFLCFVENLDFVDALYCVCSTVTTLGYGDKSFSTTIGRTFAVFWILSSTICLAQSFAYLAELYTDDRQRSLAKMVLTRKLSPLDLEAADLDGDKAVSAAEFVVYKLKEMGKINQEDISAVMEIFRKLDCDHSGTLTESDIRNSEF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00061 350 Gene3D - 172 270 - -
Car07g00061 350 PRINTS Two pore domain K+ channel signature 111 139 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car07g00061 350 PRINTS Two pore domain K+ channel signature 228 237 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car07g00061 350 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 18 345 IPR003280 GO:0005267|GO:0016020|GO:0071805
Car07g00061 350 MobiDBLite consensus disorder prediction 1 16 - -
Car07g00061 350 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 18 345 - -
Car07g00061 350 MobiDBLite consensus disorder prediction 1 50 - -
Car07g00061 350 SUPERFAMILY Voltage-gated potassium channels 183 284 - -
Car07g00061 350 SUPERFAMILY Voltage-gated potassium channels 69 156 - -
Car07g00061 350 MobiDBLite consensus disorder prediction 17 37 - -
Car07g00061 350 ProSitePatterns EF-hand calcium-binding domain. 333 345 IPR018247 -
Car07g00061 350 Gene3D - 53 171 - -
Car07g00061 350 SUPERFAMILY EF-hand 290 347 IPR011992 -
Car07g00061 350 Gene3D - 271 349 - -
Car07g00061 350 Pfam Ion channel 197 268 IPR013099 -
Car07g00061 350 Pfam Ion channel 76 155 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00061 Car-Chr7 624691 627619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00061 51 345 Ion Channels AT5G55630 57.288 5.58e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00061 K05389 - gmx:100799492 531.946