Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g00046 ATGGAAACGAAGCATGATATTGATGATGAGTGTTTGCACTACGATGATGAAGAAATTAGTAATTCCAGTAGTTGTGTTTGCGGTTTAATTGAGTTTAAGAAAAGTGAAATGTTTGATTACAATTTGAGCAGCACAGGATCAGACGGTGGAGATTCAGAGGATCTGTTTGAGATAAATCTGAATTGGAAGGAGCGATTGGATTCAATAAGAGAAGAAGAAGAGTGTGAGAGTAGTACCGTGTTCTCTCTTGATATCAATAATAACGAGGAGAAAATAATATTAGATGATGTTGTTTATGTGGCAGTAGGAGTAGATATTGATGGTGGTGGTTCATCAAGCATGGAAGCTCTTTCGTGGGCCTTGAAACATGTTGTCACACCTTATACTAAACTCTCTCTAATACACGTTTTTCCTCAAGTCAAGCTAATTCCAACTCCATTGGGAAAAATTCCAAGGTGTCATGTAAATCTTGAGCATGTTGATATCTACTTGACCCAAAAGAAAAACAAGAGGAAATTGCTCATTCAGAAGTTCATTAACCTATGTGTTGAATCAAAGGTTAAGGTAGAGATGATGCTTGTTGAGGGTGATAATGTTGCTAAAGCCATTGTAGATCTTGTTGCGAATCTAAATATAAGGAAATTGGTGATTGGAACTAACCAATCTAATCTAAGAAAACTCAGGTCTAGAAGACAAACTTCCATTGCGGACAAGGTGTTAAAAACTATACAAGAAAATTGTGATGTCAAAATTATATGCGAAGGAAAAGAAGTGATCGACCAGATGATTAATTATTGTACTTCAGAACACTTCAAAGACAACATTACTTCAAAAATGTCAAATGAAATTGATGAATATCGCGATTTTGTTCCAATCAAACGTTTGTTGCCGAATCCATTATGGTTATTTAGGACCAAATTTGTATTATCATGA 933 0.3526 METKHDIDDECLHYDDEEISNSSSCVCGLIEFKKSEMFDYNLSSTGSDGGDSEDLFEINLNWKERLDSIREEEECESSTVFSLDINNNEEKIILDDVVYVAVGVDIDGGGSSSMEALSWALKHVVTPYTKLSLIHVFPQVKLIPTPLGKIPRCHVNLEHVDIYLTQKKNKRKLLIQKFINLCVESKVKVEMMLVEGDNVAKAIVDLVANLNIRKLVIGTNQSNLRKLRSRRQTSIADKVLKTIQENCDVKIICEGKEVIDQMINYCTSEHFKDNITSKMSNEIDEYRDFVPIKRLLPNPLWLFRTKFVLS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g00046 310 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 21 304 - -
Car07g00046 310 Pfam Universal stress protein family 102 241 IPR006016 -
Car07g00046 310 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 21 304 - -
Car07g00046 310 CDD STK_N 97 255 - -
Car07g00046 310 Gene3D HUPs 98 261 IPR014729 -
Car07g00046 310 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 102 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g00046 Car-Chr7 516338 518748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g00046 99 277 Plant U-box Gene Family AT5G57035 29.101 2.44e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car07g00046 - - pvu:PHAVU_003G088000g 306.605