Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03890 ATGAAATTACAGGCACATATTCCAGGACAGATATCAGGACAGGTACCCAATCAAGCAGGGTCTCAGTTGCCTGGACTCACCCAATTGAATGGAAATGCTTTCCCTTCACAGATGCCATCTTTAGGTGGTGTATCACGATCCGCAATTAATATGGACCCTGAATTTCTTAGAGCACGTGCATTTATTCAAGAGAAGATATGTGATATGTTATTGCAACGGCATCAGCAGCCAATTACTGAAATGCAGAGAAGGAGGATTAAGGATCTTTCAAAACGCCTCGAGGAGGGCATGTTAAAAGCTGCTCTCTCTAAGGAGGACTACATGAACTTGGATACACTAGAGAGTCGTTTATCTAATTTCCTCCGACGAGCATCTATGAATAATCACAACCAACAGTATCCCCAGCTTGTTAGCTCTTCTCCCATTGGTACAATGATACCAACCCCTGGTATGTCGCATGGGCCAAATTCAAGCATGGTGGTTTCATCTTCTATAGACGCCTCAATGATTTCTTCCAGTGGGTGTAATAGCATAGTATCAACATCTTTCAACAGTGTAAATATGTTACCAGCTGGTGGCATGCTTGGCAGTTCCTTAAATAGATCTGATGGTTTGTCAAATGGATATCAACAGTCTTCTACCAGCTTTTCTGTTGGCTCGGGGGGGAACATGTCATCAATGGGTGTGCCGAGAATTTCAAGCCAGATGATTCCTACGCCGGGATTTACAGTCAACAGCAATCACTCACATCTGAATATAGATTCGTCTACTAATGGAAGTGTCTTTTCTAGTGCAGAGTCTACTATGGTAACACAGTCACAGCTGCAGCAGCAGAAACAGAATGTTGGTGACCAAAGTCATCTATTGCAGAACCTTGGCAGCCAAATGAGTAGTGGAATGAGATCTGGTTTGCTACAAAAACCATTTACAAACTCAAATGGTACTATAAATAATGGGCTAGGCTTGATTGGTAACAATATCCAACATGCAAATGAAGCAGGAACTTCCGATGGCTATGCCTCAACTTATGTCAATTCCCCTAAACACACACATCAACACTTTGACCAAAATCAGAAAACAGTAGTGCAGGGTGATGGGTATGGATTGAATAATGTTGACACTTTTGCTTCTGGAAACTTTTATGCATCTGCGACATCTTCTGGGTCTATGATGAACACTCAGAACACGAATTCAGTAAAATTGACATCAATACCCAAAACTAACTCATTGATCAGTGGTCACTCAAATTTGCATGGTATGCAGCAGGCTGCTCATATAAAGTCTCAAGCAATCAATCACTTGGAAAAATTGAATTTTCAGTCTTCATCGACTTCAAGAGATGCCCTTCTGCATTCTCAACAGCAGTATCAGCAAAAGCCCCAGCAATTTCAACAGCCAGAGCCGTATTCACAATCACAACAACAATTTCAATTGAAGCTACATAGTCAACAGCCTCAGCATTTGGTCAACAATGATGCTTTCAATCAGTCTCAGCTGTCTTCCAATCTAGAAAACCAAGTGAAGTCAGAGCCTGGACTTGAACACCATAAAGAAGTGCTCAATTCTCATGTTCCTGAACAGTTCCATATGTCTGAGATGCAGAATCAGTTCCAGCAAAACTCATCTGAAGATTGCACTAGGAGTGCTCAATACCTTTCATTTCCATCTGGTCAGCATGAGTTAACCTCATCAGCACCACAAAATTCGCAACAAATGTTGCATCCACACCAATTGGTTGCAGAGTCTCAAAATAAGTTCAGCTGTCTTACAGTTGGGGCACAATCCAATTCCAAATCAATAGTTCTAAACCAATGGCCTGACTCACAAGATGGCAACCACATGCCTAACAATATTTCACATGACCAGCATCTCCATGTGGATTTTCATCAAAGAATATCTGGGAAGGATGAAGCTCATTGCAATAATTTATCATCAGATGTATCTATGAGCCAAGCTGCTGCTCCTAGAGGTGCAGCTGAGCCACTAGACCCGGGAAGTGCTATCAAAAAGGCACACAGGAATCAACAAAGGTGGCTTTTATTTCTACTTCATGCTCGACGATGTTCTGCTCCTGAAGGACGATGCCAAGAACGCTTTTGTTCTATTGCACAGAAGTTATGTAAGCACATAGATGGATGCACCCTGCGACATTGTCCATACCCTCGTTGTCATCATACCAGGGTATTGCTTCATCATTTCATACACTGCAAGGATCTATGTTGCCCTGTTTGTGTTTTTGTAAGAAATTACCGGCGCACATTTCAACTCAAACCTCAGATTCAGCCAGAATCTGAATCAAGTTTGCCAAGTATGGTAAATGGATCCTGTAAATCTTACAATATAACAGCCATGTCATCTAGATTGATATCGAAGCCTCCATTAGTTGTGGAAACTTCAGAAGACATGCACCCATCTCTAAAGCGCATAAAGATTGAGCATTGCACCCAGTCTGTTAATCTTGAAAATGACAATTCTGCTTCATCTGTTTCTGCAAATTGTGAATCTCTTGTTTCCAGGGATGCTCAGTCCCAAACCTATCCCAATGCTGAGAAGTCTATCTCAATTAAATCAGAGCTTACAGAAGTAAAAGCAGAAGCATCAGCTCATGCAAAGCTTAGTGAGATGAAGATGGATTCCAATAATACAGATGGTAAAATTCTTGATGGTGAGTCTGTTAAGTATGACGATCCTAGTAATTTAGCCAGGCCAGAAAATATAAAAACTGAGAAAGAAATTGGACCAGATAAACAAGAAAATGTGATGCAGCAATGTGAGAATGCAGCTGGAACAAAATCTGGTAAGCCAAAAATAAAGGGGGTCTCTTTAACCGAATTATTTACTCCAGAGCAAGTCAGGGAACATATCACTGGTCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAGGCAGAGAAGAATCAAGCAATGGAGCACTCTATGAGTGAGAATTCCTGTCAGTTATGTGCTGTAGAGAAGCTTACATTTGAACCACCTCCTATTTATTGTACAACATGTGGGGTTCGCATCAAGCGAAACAATATGTACTATACCATGGGTACTGGTGATACTCGACATTATTTTTGTATCCCATGCTATAATGATGCTCGTACAGAACACATTGTTGTTGATGGGACTCCCATTGCCAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACCGAGGAATGGTGGGTTCAATGTGATAAATGCGAAGCTTGGCAACACCAAATATGTGCCTTGTTTAATGGAAGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGCTACATTGAAGAGGTAGAGCAAGGAGAGCGCAAACCATTACCCCAAAGTGCTGTTCTTGGAGCGAAGGATTTACCGAGAACTATTCTTAGTGACCATATAGAACAACGGTTGTTTAAGCGGCTAAAGCACGAAAGGCAAGAGAGAGCAAGGTTTCATGGGAAAAGCTATGATGAGGTGCCTGGAGCTGATTCTCTTGTCGTAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGTTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCAAAGGTAGTTTTGCTATTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAATGTCAATTTCCCAATCAGCGCCGGGTGTATCTTTCATATTTGGACTCTGTGAAGTATTTCAGGCCTGAGATTAAATCAGTAACTGGAGAGGCTCTTCGAACATTTGTTTACCATGAAATTCTGATTGGATATCTTGAATATTGTAAGAAACGTGGTTTTACCAGCTGCTATATATGGGCTTGTCCTCCATTAAAGGGTGAAGACTATATTTTATATTGTCATCCAGAAATTCAGAAAACGCCAAAATCTGATAAGCTTCGTGAATGGTATCTAGCCATGTTAAGAAAAGCTGCTAAGGAGAATGTTGTGGTCGATATCACCAACTTATATGATCATTTCTTCACATCTACCGGTGAATGTAGGGCTAAGGTTACGGCAGCAAGACTCCCATATTTTGATGGTGACTACTGGCCCGGGGCTGCAGAAGATTTGATCTATCAGCTACGTCAAGAGGAAGACGGAAGAAAACAAAATAAAAAAGGAACAACCAAAAAGACTATTACAAAAAGGGCTTTAAAAGCTTCTGGTCAGTCAGATCTTTCAGGAAATGCCTCGAAAGATCTGCTCCTCATGCACAAACTTGGCGAAACCATTTCCCCGATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGTACCCACTGCTGTATTCTAATGGTGTGTGGTAACCGTTGGGTTTGTAATCAGTGCAAGAACTTTCAGATTTGTGATAAGTGTTATGAAGCAGAGCTAAAGCGTGAAGAGAGAGAAAGACATCCTGTTAATCAGAGGGAAAAACATACTCTTTATCAAGTTGAAATTACTGATGTACCATCTGATACAAAGGATAGAGATGATATTCTTGAAAGTGAATTCTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTACCAGTATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTCCTATATCATCTTCATAATCCAACTGCTCCTGCATTTGTGACAACTTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCAGAGTACGATGTATGCAATTCTTGTTATCAAAAGGGAGGCATTGATCATCCTCATAAGTTGACAAATCATCCGTCAATGGTGGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCATAGAGTATTGCAGCTAAGGAAAATGCTCGATCTTCTAGTGCATGCATCCCAATGTCGCTCTGCACATTGCCAATATCCTAATTGTCGTAAAGTGAAGGGCCTTTTCCGCCATGGTATGCACTGCAAAACACGTGCTTCTGGAGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCGTGCAAAGAATCCGAATGCCATGTACCACGATGCAGAGATTTAAAAGAACATTTAAGGAGGCTGCAGCAGCAGTCTGATTCACGGCGTAGAGCTGCTGTAATGGAAATGATGAGGCAGAGAGCAGCAGAAGTTGCTAGCAATGCTGGATGA 5196 0.4128 MKLQAHIPGQISGQVPNQAGSQLPGLTQLNGNAFPSQMPSLGGVSRSAINMDPEFLRARAFIQEKICDMLLQRHQQPITEMQRRRIKDLSKRLEEGMLKAALSKEDYMNLDTLESRLSNFLRRASMNNHNQQYPQLVSSSPIGTMIPTPGMSHGPNSSMVVSSSIDASMISSSGCNSIVSTSFNSVNMLPAGGMLGSSLNRSDGLSNGYQQSSTSFSVGSGGNMSSMGVPRISSQMIPTPGFTVNSNHSHLNIDSSTNGSVFSSAESTMVTQSQLQQQKQNVGDQSHLLQNLGSQMSSGMRSGLLQKPFTNSNGTINNGLGLIGNNIQHANEAGTSDGYASTYVNSPKHTHQHFDQNQKTVVQGDGYGLNNVDTFASGNFYASATSSGSMMNTQNTNSVKLTSIPKTNSLISGHSNLHGMQQAAHIKSQAINHLEKLNFQSSSTSRDALLHSQQQYQQKPQQFQQPEPYSQSQQQFQLKLHSQQPQHLVNNDAFNQSQLSSNLENQVKSEPGLEHHKEVLNSHVPEQFHMSEMQNQFQQNSSEDCTRSAQYLSFPSGQHELTSSAPQNSQQMLHPHQLVAESQNKFSCLTVGAQSNSKSIVLNQWPDSQDGNHMPNNISHDQHLHVDFHQRISGKDEAHCNNLSSDVSMSQAAAPRGAAEPLDPGSAIKKAHRNQQRWLLFLLHARRCSAPEGRCQERFCSIAQKLCKHIDGCTLRHCPYPRCHHTRVLLHHFIHCKDLCCPVCVFVRNYRRTFQLKPQIQPESESSLPSMVNGSCKSYNITAMSSRLISKPPLVVETSEDMHPSLKRIKIEHCTQSVNLENDNSASSVSANCESLVSRDAQSQTYPNAEKSISIKSELTEVKAEASAHAKLSEMKMDSNNTDGKILDGESVKYDDPSNLARPENIKTEKEIGPDKQENVMQQCENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNDARTEHIVVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVEQGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKHERQERARFHGKSYDEVPGADSLVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGAECQFPNQRRVYLSYLDSVKYFRPEIKSVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENVVVDITNLYDHFFTSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACTHCCILMVCGNRWVCNQCKNFQICDKCYEAELKREERERHPVNQREKHTLYQVEITDVPSDTKDRDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNSCYQKGGIDHPHKLTNHPSMVDRDAQNKEARQHRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVASNAG 1731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03890 1731 SMART zz_5 1553 1598 IPR000433 GO:0008270
Car06g03890 1731 SMART zz_5 1433 1477 IPR000433 GO:0008270
Car06g03890 1731 Gene3D TAZ domain 665 752 IPR035898 -
Car06g03890 1731 SUPERFAMILY RING/U-box 1414 1486 - -
Car06g03890 1731 SUPERFAMILY TAZ domain 1615 1698 IPR035898 -
Car06g03890 1731 Gene3D - 1430 1490 IPR043145 -
Car06g03890 1731 Gene3D - 1553 1606 IPR043145 -
Car06g03890 1731 SUPERFAMILY TAZ domain 672 751 IPR035898 -
Car06g03890 1731 ProSiteProfiles Zinc finger ZZ-type profile. 1434 1497 IPR000433 GO:0008270
Car06g03890 1731 SMART TAZ_2 669 747 IPR000197 -
Car06g03890 1731 SMART TAZ_2 1616 1694 IPR000197 -
Car06g03890 1731 ProSiteProfiles Zinc finger ZZ-type profile. 1554 1606 IPR000433 GO:0008270
Car06g03890 1731 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1051 1099 IPR013083 -
Car06g03890 1731 ProSitePatterns Zinc finger ZZ-type signature. 1559 1586 IPR000433 GO:0008270
Car06g03890 1731 ProSitePatterns Zinc finger PHD-type signature. 1027 1098 IPR019786 -
Car06g03890 1731 MobiDBLite consensus disorder prediction 879 901 - -
Car06g03890 1731 SUPERFAMILY RING/U-box 1535 1602 - -
Car06g03890 1731 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1116 1552 IPR031162 GO:0004402
Car06g03890 1731 Pfam Histone acetylation protein 1157 1377 IPR013178 GO:0004402|GO:0006355|GO:0016573
Car06g03890 1731 Gene3D TAZ domain 1610 1727 IPR035898 -
Car06g03890 1731 MobiDBLite consensus disorder prediction 1380 1404 - -
Car06g03890 1731 Pfam TAZ zinc finger 1623 1693 IPR000197 -
Car06g03890 1731 Pfam TAZ zinc finger 676 744 IPR000197 -
Car06g03890 1731 SMART KAT11_2 1149 1446 IPR013178 GO:0004402|GO:0006355|GO:0016573
Car06g03890 1731 ProSiteProfiles Zinc finger TAZ-type profile. 1613 1696 IPR000197 -
Car06g03890 1731 PANTHER CBP/P300-RELATED 128 1729 IPR013178 GO:0004402|GO:0006355|GO:0016573
Car06g03890 1731 PANTHER HISTONE ACETYLTRANSFERASE HAC12 128 1729 - -
Car06g03890 1731 Pfam Zinc finger, ZZ type 1556 1597 IPR000433 GO:0008270
Car06g03890 1731 SUPERFAMILY FYVE/PHD zinc finger 1060 1100 IPR011011 -
Car06g03890 1731 ProSiteProfiles Zinc finger TAZ-type profile. 666 747 IPR000197 -
Car06g03890 1731 CDD PHD_HAC_like 1026 1098 - -
Car06g03890 1731 Pfam PHD-finger 1057 1099 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03890 Car-Chr6 70748022 70764108 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Car06g03890 HAT_KAT11 3e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03890 K04498 - gmx:100809207 2966.41