Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03875 ATGGATTCAAAGAAATCTAACAAGATAAGAGAGATTGTTAGGCTTCAACAAATCCTCAAAAAGTGGAAGAAGGTTGCTACAAATGCTTCAAACAACAACTCAagtagtagtagtagtaatagtactagtagtGGCAATAAAGGTATCAAGTTTTTGAAACGAACTTTGTCATTCAATGATGTTTCAAATTCCAATGTGGACATAATTCCAAAAGGGTTTCTAGCTGTTTGTGTTGGGAAAGAGCTCAAGAGATTCATTATTCCAATGGATTACTTAAAACATCAAGCATTTGAGGTTTTGCTACAAGAAGCTGAAAATGAGTTTGGTTTCCAACAAGAGGGTGTGCTCAAAATTCCATGTCAAGTTTCTATGTTTGAGAAAATATTGAAGGTGGTGGAAGATAAAAAAGAAGCCTTAAATTTGCATGAGTTTGGATTGGGTGGAGACAATGTTACTCCCACCCATCATGCTCAAGTTTGTAGATGA 486 0.3354 MDSKKSNKIREIVRLQQILKKWKKVATNASNNNSSSSSSNSTSSGNKGIKFLKRTLSFNDVSNSNVDIIPKGFLAVCVGKELKRFIIPMDYLKHQAFEVLLQEAENEFGFQQEGVLKIPCQVSMFEKILKVVEDKKEALNLHEFGLGGDNVTPTHHAQVCR 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03875 161 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 140 IPR003676 GO:0009733
Car06g03875 161 PANTHER OSJNBA0060N03.10 PROTEIN 5 140 - -
Car06g03875 161 Pfam Auxin responsive protein 20 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03875 Car-Chr6 70578129 70578818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03875 1 161 Calmodulin-binding Proteins AT2G24400 55.901 2.20e-55 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03875 K14488 - zju:107428189 220.705