Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03872 ATGATGGATGAAGACATGGAGAGTGGTACTATGGGTTCTTACCACGATAAGCCCAGAACTTTCCCTAACATGCGTAGTAAAGCTTATACCCCATTGATATTTCGTATTCTGCTGGGTATAAATGTTCGTGTCCTGTTCATTCTTTTACTGCTGGGGTTTGGAGCTATCTTTTACGTGGGTGCAAGAACATCTCCAATTATTGTGTTTGTCATCTCTATTTGTATCCTCAGCTTCCTTGTGGCGTTATATCTAATGAAGTGGGTGCTCGCTAAAGATGAGGGTCCCCCTGAAATGGTTCAGATAGCTGATGCTATACGAGATGGAGCTGAAGGATTTTTTAGGACCCAGTATGGGACTATATCAAAGATGGCTCTGTTACTTGCTCTTGTCATTCTTTTCATATATTTGTTTCGCGATACAACTCCTCAACAGGAAGCTGCTGGCATAGGAAGGTCGACATCTGCATACATCACTGTAGCTTCTTTCCTTTTAGGTGCCGTTTGTTCAGGTTTTGCTGGATATGTAGGGATGTGGGTATCAGTTCGCGCCAATGTCAGAGTCTCTAGTGCCGCGAGAAGGTCTGCAAGAGAGGCATTGCAGATAGCTACTCGTGCAGGTGGTTTATCAGCTCTCATTGTTGTTGGTATGGCTGTAATTGGCATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACTCGCCAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTGGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTGTTTGCTCAGTTGGGTGGTGGAATATACACTAAAGCAGCTGATGTTGGGGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCTGCTGTTATTGCTGACCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTCGAAAGTATCGCAGCTGAAATAATCAGTGCCATGATACTTGGTGGAACAATGGCACAGCGCTGTAAAATCGAAGATCCATCTGGCTTCATCTTGTTTCCCCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCGGTGGGAATATTTTCTATTAGGGGTACACGTGAATCTGGAGTGATGTCTCCTATAGAAGATCCTATGGCAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTGGCATTTGGTCTGTCCACCCGGTGGTTACTTTATGTCGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGATTGGTATTGTCACCGCGTACATTTTTGTCTGTATCACCAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCACATTAGCCCTTTCTAGCTCTACTGGCCATGGGACTAACATAATTGCCGGGGTCAGTTTGGGGCTGGAATCTACTGGTCTTCCAGTCCTTGTCATCAGTGTGTCGATTGTCTCCGCTTACTGGCTGGGCCAGACTGCTGGACTAATAGATGAAACAGGAAACCCAACTGGTGGGCTGTTTGGAACAGCTGTAGCAACAATGGGAATGCTTAGCACTGCTGCCTATATACTTACTATGGATATGTTTGGCCCGATAGCTGATAATGCTGGAGGAATTGTAGAAATGAGTCAGCAGCCTGAAAGTGTTCGAGAGATCACCGATGTCCTTGATGCCGTGGGGAACACAACCAAAGCCACCACCAAAGGATTTGCTATTGGTTCTGCTGCACTTGCATCTTTCCTTCTGTTTAGTGCTTATATGGATGAGGTTGCTGCATTTTCTCGTGAACCTTTTAAACAGGTTGATATTGCAATTCCAGAGGTTTTCGTTGGTGGTTTGCTGGGTGCCATGCTTATATTTGTCTTTAGTGCTTGGGCGTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCGGATTATGGTCGCTGTGTTGCAATTGTAGCATCTGCGTCATTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTGCAGTTGGTTTTATATTCCGAATTTTGGGCTACTATACAGGACAACCCTTACTCGGGGCAAAAGTTGTGGCTGCTTTGCTGATGTTTGCAACAGTGTCTGGTATTCTCATGGCACTTTTTCTGAACACAGCTGGTGGTGCTTGGGATAATGCAAAGAAGTACATAGAGACTGGAGCTCTTGGAGGCAAGGGAAGCGATGCTCACAAAGCAGCAATAACAGGAGATACAGTGGGAGACCCATTCAAAGACACAGCTGGGCCTTCACTTCATGTTCTGATAAAGATGCTCTCGACGATTACACTGGTAATGGCTCCCATTTTCCTGTGA 2406 0.4485 MMDEDMESGTMGSYHDKPRTFPNMRSKAYTPLIFRILLGINVRVLFILLLLGFGAIFYVGARTSPIIVFVISICILSFLVALYLMKWVLAKDEGPPEMVQIADAIRDGAEGFFRTQYGTISKMALLLALVILFIYLFRDTTPQQEAAGIGRSTSAYITVASFLLGAVCSGFAGYVGMWVSVRANVRVSSAARRSAREALQIATRAGGLSALIVVGMAVIGIAVLYATFYVWLGVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIEDPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVMSPIEDPMAILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLIGIVTAYIFVCITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTGLPVLVISVSIVSAYWLGQTAGLIDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVAAFSREPFKQVDIAIPEVFVGGLLGAMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPIAVGFIFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAITGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFL 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03872 801 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 19 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Car06g03872 801 PIRSF H+-PPtase 60 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Car06g03872 801 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 64 801 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Car06g03872 801 PANTHER INORGANIC DIPHOSPHATASE-RELATED 19 801 - -
Car06g03872 801 Pfam Inorganic H+ pyrophosphatase 75 796 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Car06g03872 801 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 69 800 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03872 Car-Chr6 70548391 70557291 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03872 1 801 Primary Pumps ATPases AT1G16780 87.141 0.0 1443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03872 K23025 - gmx:100787805 1392.48