Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03865 ATGCCTGCCGTTTATGGAGGATCTCGTATGACTACCTTCGAGGACTCCGAGAAGGAGAGTGAATACGGTTACGTTCGCAAGGTATCTGGACCTGTGGTGGTTGCAGATGGAATGAATGGGGCTGCTATGTATGAACTCGTTCGTGTTGGTCATGATAATCTCATCGGTGAAATTATTCGATTGGAAGGGGACTCTGCCACTATTCAAGTTTATGAGGAAACGGCTGGGTTAATGGTTAATGATCCTGTGTTACGTACACACAAGCCTTTGTCCGTGGAGTTGGGACCTGGAATTTTGGGAAACATTTTTGATGGAATTCAGAGGCCTTTGAAAACTATTGCAAAAATATCTGCTGATGTCTATATTCCTCGTGGTGTCTCTGTTCCTGCACTTGACAAAGATACACTCTGGGAATTTAGTCCGAAGAAAATTGGTGAAGGAGACCTATTAACTGGTGGAGACTTATATGCTACTGTTTTCGAGAACAGTTTAATGGAACACCGTGTTGCACTTCCTCCTGATGCCATGGGAAAGGTTACCTATGTAGCACCGGCTGGCCAATATTCCCTGAAGGACACTGTGTTGGAACTTGAGTTTCAAGGTGTCAAAAAGAAGTTCACCATGCTTCAGAGTTGGCCTGTACGTACACCAAGGCCTGTTGCATCAAAACTTGCAGCTGATACTCCTCTTCTTACTGGTCAGCGTGTTCTTGATGCCCTTTTCCCCTCAGTACTTGGTGGGACTTGTGCCATTCCTGGAGCTTTTGGTTGTGGCAAAACAGTCATTAGTCAGGCTCTTTCTAAGTATTCTAATTCTGATGCTGTTATTTACGTTGGTTGTGGGGAACGTGGGAATGAAATGGCAGAGGTTCTGATGGACTTTCCACAACTTACAATGACATTACCTGATGGTCGTGAAGAATCTGTCATGAAGCGTACAACACTAGTAGCTAACACTTCAAACATGCCGGTGGCTGCTCGTGAAGCTTCAATTTATACAGGAATCACTTTAGCCGAGTATTTTAGAGATATGGGTTACAATGTCAGTATGATGGCAGATTCAACATCTCGATGGGCAGAAGCATTGCGTGAAATCTCAGGAAGACTGGCGGAAATGCCTGCAGATAGTGGATATCCGGCTTACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCCGGGAAAGTAAAATGCCTTGGAGGTCCTGAACGGACAGGTAGTGTAACAATTGTTGGTGCTGTTTCTCCACCTGGAGGAGATTTCTCAGATCCCGTGACATCTGCAACCCTCAGCATAGTTCAGGTTTTCTGGGGATTGGACAAAAAGCTTGCTCAGAGGAAGCATTTTCCTTCTGTGAACTGGCTTATTTCTTATTCAAAGTACTCAACGGCACTCGAATCCTTTTATGAGCAATTTGATCCAGATTTTATAAACATCAGGACAAAGGCTCGTGAAGTTCTTCAAAGAGAAGATGATCTAAATGAAATTGTCCAGCTTGTGGGAAAGGATGCTTTAGCTGAAGGAGATAAGATCACCTTGGAAACTGCAAAACTTTTGAGAGAGGATTATCTTGCTCAAAATGCTTTTACGCCATATGACAAGTTCTGTCCCTTCTACAAATCTGTCTGGATGATGCGCAACATTATTCATTTCTTCAATTTGGCAAATCAGGCGGTAGAGAGGGGAGCTGGCACCGATGGTCAGAAGATAACTTACACCCTCATCAAGCATCGTTTGGGAGATCTCTTCTATCGTTTAGTGTCTCAGAAATTTGAGGATCCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAAGGGGAAGCCGCATTGGTTGCCAAATTTAATCAGTTACATGAGGACTTGACTAATGGTTTCCGTAACCTTGAGGATGAAGCCCGATAA 2325 0.3553 MPAVYGGSRMTTFEDSEKESEYGYVRKVSGPVVVADGMNGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKISADVYIPRGVSVPALDKDTLWEFSPKKIGEGDLLTGGDLYATVFENSLMEHRVALPPDAMGKVTYVAPAGQYSLKDTVLELEFQGVKKKFTMLQSWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDAVIYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFFNLANQAVERGAGTDGQKITYTLIKHRLGDLFYRLVSQKFEDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEAALVAKFNQLHEDLTNGFRNLEDEAR 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03865 774 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 472 554 - -
Car06g03865 774 Gene3D - 135 206 - -
Car06g03865 774 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 233 459 IPR000194 GO:0005524
Car06g03865 774 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 745 773 IPR022878 GO:0046034|GO:0046961
Car06g03865 774 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 4 595 IPR022878 GO:0046034|GO:0046961
Car06g03865 774 Gene3D - 21 90 IPR023366 -
Car06g03865 774 Coils Coil 752 772 - -
Car06g03865 774 Coils Coil 746 748 - -
Car06g03865 774 CDD ATP-synt_V_A-type_alpha_C 476 582 - -
Car06g03865 774 Hamap V-type ATP synthase alpha chain [atpA]. 20 773 IPR022878 GO:0046034|GO:0046961
Car06g03865 774 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 745 773 - -
Car06g03865 774 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 4 595 - -
Car06g03865 774 ProSitePatterns ATP synthase alpha and beta subunits signature. 450 459 IPR020003 GO:0005524
Car06g03865 774 CDD ATP-synt_V_A-type_alpha_N 22 88 - -
Car06g03865 774 Pfam ATPsynthase alpha/beta subunit N-term extension 103 224 IPR031686 -
Car06g03865 774 CDD V_A-ATPase_A 89 461 - -
Car06g03865 774 Pfam ATP synthase alpha/beta family, beta-barrel domain 26 86 IPR004100 GO:0046034|GO:1902600
Car06g03865 774 Gene3D - 460 598 IPR024034 -
Car06g03865 774 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 463 IPR027417 -
Car06g03865 774 Gene3D - 92 458 IPR027417 -
Car06g03865 774 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 18 90 IPR036121 GO:0046034|GO:1902600
Car06g03865 774 TIGRFAM V-ATPase_V1_A: V-type ATPase, A subunit 21 595 IPR005725 GO:0033180|GO:0046961|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03865 1 594 Primary Pumps ATPases(2) AT1G78900 94.613 0.0 1168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03865 K02145 - gmx:100775727 1138.64