Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03859 ATGCTATCCCGATTAGTTGATGGAAACGGCGAGATGGAAGTTTCTGGGGATGCTGGTTTGGTGGAACCAAATGATGGATGTAGATTGCTTGAGAGTTATTCTGGGAGAGAATTAGGTACCTCTCATCATGACCATGCTATTCAGgaaccatatgaaggcatggaatttgtatctgaagacgctgctaagatattttacgatgaatatgcccgacatgtgggatttgtcatgcgtgtgatgtcgtgtcggcgctcagaaagagacggtaggattcttgctcgcaggcttggatgtaataaggagggtcattgtgtcagcatccgagggaaatttgggccagttcgtaaaccaaggtccagcacaagggatggttgtaaggcgatgattcatatcaagtatgataagtctggaaaatgggtgataacaaagtttgtgaaggatcacaatcatccactagtagtctctccacgcgaagcacgCCAAACAGTGGATGAGAAGGATAAGAAAATTCAGGAATTAACCACAGAGCTTCGGATTAAAAAGAGGTTGTGTGCAACATATCAAGAACAGTTAACTTCTTTTATGAAAACTGTTGAAGACCACAGTGACAAGCTGTCTGCGAGAATTCGTCACATACTTGGTAATCTTAAAGAATTTGAATCCATAGAAGAGCTTTTGCTCCAGAGGGCGTGCGCGCGGTGTGATCACTAA 711 0.2222 MLSRLVDGNGEMEVSGDAGLVEPNDGCRLLESYSGRELGTSHHDHAIQEPYEGMEFVSEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRSSTRDGCKAMIHIKYDKSGKWVITKFVKDHNHPLVVSPREARQTVDEKDKKIQELTTELRIKKRLCATYQEQLTSFMKTVEDHSDKLSARIRHILGNLKEFESIEELLLQRACARCDH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03859 236 Coils Coil 163 190 - -
Car06g03859 236 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 22 229 - -
Car06g03859 236 Pfam FAR1 DNA-binding domain 65 153 IPR004330 -
Car06g03859 236 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 22 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03859 Car-Chr6 70366049 70370476 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car06g03859 FAR1 1.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03859 - - gmx:100787741 380.563