Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03857 atGAAGGATAAAGATAAGGAAAAGGAATCCGAACCTAAGAAGAAATATCCTATTGGTTCCGAACATTACCTTCTCTACGAAGAAATTGGACAAGGCGTTAGTGCTTCCGTTCATCGCGCTTTATGTGTTCCTTTTAACGAGATCGTCGCCATCAAGATTCTCGACTTCGAACGCGATAACTGCGATCTGAATAATATATCTCGTGAAGCACAAACGATGGTACTAGTGGACCACCCTAACGTATTGAAATCACACTGTTCATTCGTGAGCGATCACAATCTATGGGTTGTGATGCCGTTTATGGCGGGTGGTTCATGTCTTCACATATTGAAAGCAGCACATCCTGATGGATTTGAAGAGGTTGTTATTGCAACTGTACTTAGGGAGGTGTTGAAGGGTTTAGAGTATCTTCATCATCATGGTCACATTCACCGTGATGTTAAGGCTGGTAATGTTCTTATTGATTCTCGCGGTGCTGTTAAGCTCGGCGATTTCGGTGTTTCCGCTTGTCTTTTTGATTCAGGTGATCGACAACGGTCTAGAAATACTTTTGTTGGAACGCCGTGTTGGATGGCACCTGAAGTTATGGAGCAAGTGCATGGTTATAACTTCAAAGCTGACATATGGTCATTTGGCATAACTGCATTGGAGCTTGCCCACGGCCATGCTCCTTTCTCAAAGTTTCCACCATTGAAGGTACTGCTTATGACTTTGCAAAATGCACCCCCAAGCCTTGATTATGAAACGGATAAAAAGTTCTCTAAGTCTTTTAAGCAGATGATTGCTTGTTGTTTGGTAAAAGATCCTTCAAAACGACCCTCTGCAAACAGGTTGTTAAAGCATTCCTTCTTTAAGCAAGCTCGCTCCAATGATTATATTTCACGCACGCTTTTAGAGGGGTTGCCTGCTTTAGGTGATCGCATGGAAATCCTAAAGAGAAAAGAAGAAGATATGCTTGCACAAAAGAAAATGCCTGATGGACAGATGGAAGAATTATCTCAGAATGAATACAAACGTGGCATTAGCGGCTGGAACTTCAATCTTGAAGATATGAAGGCTCAAGCTTCCTTGATCAACGATTTTGATGATGCTATATCAGATATGAATCATGTGGGAAGTTCATCTTCACTTGATGCACAAGATAAGCAATTGCCAAATTCAAGTCATAATCGTAGTCAAACTGTTGACATGGAGGAAAATGATGAAATGCTTAATCAATCGGCTTCTGTTCTCGTAGTTGATTCCACAGTAAATGATGCCAAGACTAAGATTGAAAAATCTGATGATGACTCTAGCATCACCAGTTCAAGCCACGAACCACAAGCTTCTTCTTGTCTTGATGATCACGTGGACCATAGTTTAAGTGAAAAATCTGATATGGAAAATGGTGCAAGATCTTTGGAGGGTGTGGCTATCCATTCTCATCATAGAAGAGGATGTTCATCAAGCATATTACCGGAAGTTACTCTTCCACCTATTCGAGCAGAAAGAAATATAAATTACAGTGAGAAGCTACATATTCAGACCCAAAATTTAGTTCCACAGACAGGAGAGGATGTGCTTACTGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTACTTCTGATGACACTGATGAGAAAGCAAAGGTACCTGTTGTTCAACAGAGAGGACGTTTTAAAGTTACATCTGAGAACGTTGACCCGGACAAGGTATCTCCTTCTCCTGTACTGCAAAAGAGTCACAGCATGCAGGTTGGTTGTTTTGAGGTTATAAGCCAGCATAGTACTCCTCTACACTCACCTTATCCATTATTATCAACAATATCTGATTCTACGCCAACAAATGTTTCTGGCTGTTCACTGTTTCCTGTGTTGCACTCTGTGCTTCAGACAAATATTCTTCAGAGGGAAACTATTCTTACTTTAATGAAGCAAATTACTGCCGGCGATTCTTCTGCTGATAGCACAAATACCCCAGCACAGATAGCAGCAACGGAGAAATCCTTGCTTGAATCAGCTCACGAAAGAGAAAAGGAGTTACTTCATGAGATAACTGATTTGCAATGGAGGCTCATATGCACCCAGGAAGAGCTTCAAAAGTTGAAAACAGAAAGCGCTCAGGTGTGA 2109 0.412 MKDKDKEKESEPKKKYPIGSEHYLLYEEIGQGVSASVHRALCVPFNEIVAIKILDFERDNCDLNNISREAQTMVLVDHPNVLKSHCSFVSDHNLWVVMPFMAGGSCLHILKAAHPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNVLIDSRGAVKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQVHGYNFKADIWSFGITALELAHGHAPFSKFPPLKVLLMTLQNAPPSLDYETDKKFSKSFKQMIACCLVKDPSKRPSANRLLKHSFFKQARSNDYISRTLLEGLPALGDRMEILKRKEEDMLAQKKMPDGQMEELSQNEYKRGISGWNFNLEDMKAQASLINDFDDAISDMNHVGSSSSLDAQDKQLPNSSHNRSQTVDMEENDEMLNQSASVLVVDSTVNDAKTKIEKSDDDSSITSSSHEPQASSCLDDHVDHSLSEKSDMENGARSLEGVAIHSHHRRGCSSSILPEVTLPPIRAERNINYSEKLHIQTQNLVPQTGEDVLTELPSRVSKSSATSDDTDEKAKVPVVQQRGRFKVTSENVDPDKVSPSPVLQKSHSMQVGCFEVISQHSTPLHSPYPLLSTISDSTPTNVSGCSLFPVLHSVLQTNILQRETILTLMKQITAGDSSADSTNTPAQIAATEKSLLESAHEREKELLHEITDLQWRLICTQEELQKLKTESAQV 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03857 702 MobiDBLite consensus disorder prediction 524 544 - -
Car06g03857 702 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 701 - -
Car06g03857 702 Gene3D Phosphorylase Kinase; domain 1 12 100 - -
Car06g03857 702 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Car06g03857 702 SMART serkin_6 23 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03857 702 Gene3D Transferase(Phosphotransferase) domain 1 104 336 - -
Car06g03857 702 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 701 - -
Car06g03857 702 SUPERFAMILY Protein kinase-like (PK-like) 21 596 IPR011009 -
Car06g03857 702 CDD STKc_OSR1_SPAK 21 284 - -
Car06g03857 702 MobiDBLite consensus disorder prediction 372 397 - -
Car06g03857 702 Pfam Protein kinase domain 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03857 702 ProSiteProfiles Protein kinase domain profile. 23 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03857 702 Coils Coil 678 702 - -
Car06g03857 702 MobiDBLite consensus disorder prediction 423 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03857 Car-Chr6 70349648 70358242 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03857 13 684 MAP Kinase Kinase Kinase Kinase AT1G79640 61.884 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Car06g03857 Pkinase 2.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03857 K08835 - gmx:100780339 1129.01