Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03855 ATGACTATCAAAAAAGAGAACAAGGAGATGAATCAACAAAAAATAGAAGAGTTCATTTTCAAGTCCAAACTTCCTAATATATACATTCCCAAACACCTTCCTCTTCATTCATATTGCTTTGAAAATCTATCAAAGTATGGATCACTTCCTTGCCTCATCAATGCTCCTACCGGTGAAATCTACACCTACTACGACGTCGAACTCACCGCACGTCGAGTCGCCTCTGGTCTCGACAAATTCGGCGTTCGACAAGGCGATGTAATCATGCTCCTCCTACCAAATTGTCCTGAATTTGTATTCTCTTTTCTTGGCGCTTCTTTTCGTGGCGCAATAACAACCACCGCCAACCCTTTCTTCACTTCAGCTGAAATTGCTAAACAAGCAAAAGGCTCCAATGCCAAGTTGCTTGTAACACAAGTTTGTTACTATGACAAAGTTAAGGATTTGGATCATCTCAAACTTGTATTCATTGACTCGGAATTGGACTCTACCCTAGAGAATCACATACATTTTCGTGATCTAGCTCAAGCCGACGAGAATGAAATGAAAGAGGTAAACATTAAAATAAACCCTGATGATGTGGTTGCATTGCCTTATTCATCTGGAACAACAGGACTACCAAAAGGTGTGATGCTAACACACAAAGGGTTGGTAACAAGCATAGCACAACAAGTTGATGGAGAAAATCCAAATCTTTATTACCACAAAGAAGATGTGATACTTTGTGTGCTTCCAATGTTTCACATTTATTCACTCAACTCTGTTTTGCTTTGTGGTTTGAGAGCCAAAGCTGCAATTTTATTAATGCCAAAGTTTGACATTAATGCATTTTTGAGTCATGTGAATAAATATAAAGTCACTATTGCTCCTGTTGTGCCACCAATTGTTTTGGCTATTGCTAAGTCACCTGACCTTCATAAATATGACCTTTCATCAATTAGAGTTTTGAAATCTGGTGGGGCCCCACTTGGTAAGGAACTTGAGGATTCTGTTAGGGCCAAATTTCCCAAAGCAAAACTTGGACAGGGATATGGGATGACAGAGGCAGGTCCAGTGTTAACAATGTGTTTGTCATTTGCAAAAGAACCAATAGATGTGAAAGCAGGTGCATGTGGAACAGTTGTTAGAAATGCTGAGATGAAAATTGTTGATCCTGAAAATGATTCTTCTTTGCCTCGTAATCAACCTGGTGAAATTTGTATTAGGGGTGACCAAATCATGAAAGGTTATCTAAATGACCCGGAAGCAACAGAGAGAACAATAGATAAAGAAGGATGGTTACATACAGGTGATATTGGATACATTGATGATGACGATGAATTATTCATTGTTGATAGACTCAAAGAATTGATTAAATACAAAGGATTTCAAGTTGCTCCAGCTGAACTTGAAGCTATTATTCTCTCTCATCCTCAAATCTATGATGTTGCTGTCGTTCCTATGAAGGATGAAGCAGCTGGTGAGGTCCCAGTTGCATTTGTAGTGAAATCAAATAGTCAAATAAATACTACTGAGGATGAAATTAAGCAGTTCGTCTCCAAACAGGTGGTGTTTTACAAAAGAATAAACAGAGTATTCTTCATTGATGCAATTCCTAAGTCACCCTCAGGCAAAATATTACGAAAGGACCTAAGGGCTAAGCTTGCAGCTGGTGTTCCAAATTGA 1665 0.3874 MTIKKENKEMNQQKIEEFIFKSKLPNIYIPKHLPLHSYCFENLSKYGSLPCLINAPTGEIYTYYDVELTARRVASGLDKFGVRQGDVIMLLLPNCPEFVFSFLGASFRGAITTTANPFFTSAEIAKQAKGSNAKLLVTQVCYYDKVKDLDHLKLVFIDSELDSTLENHIHFRDLAQADENEMKEVNIKINPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYYHKEDVILCVLPMFHIYSLNSVLLCGLRAKAAILLMPKFDINAFLSHVNKYKVTIAPVVPPIVLAIAKSPDLHKYDLSSIRVLKSGGAPLGKELEDSVRAKFPKAKLGQGYGMTEAGPVLTMCLSFAKEPIDVKAGACGTVVRNAEMKIVDPENDSSLPRNQPGEICIRGDQIMKGYLNDPEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQIYDVAVVPMKDEAAGEVPVAFVVKSNSQINTTEDEIKQFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGVPN 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03855 554 Pfam AMP-binding enzyme 43 453 IPR000873 -
Car06g03855 554 SUPERFAMILY Acetyl-CoA synthetase-like 14 550 - -
Car06g03855 554 Gene3D - 13 447 IPR042099 -
Car06g03855 554 CDD 4CL 29 544 - -
Car06g03855 554 Pfam AMP-binding enzyme C-terminal domain 462 538 IPR025110 -
Car06g03855 554 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 13 549 - -
Car06g03855 554 ProSitePatterns Putative AMP-binding domain signature. 197 208 IPR020845 -
Car06g03855 554 Gene3D - 448 550 IPR045851 -
Car06g03855 554 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 13 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03855 Car-Chr6 70336362 70340951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03855 17 516 Monolignol Biosynthesis Gene Families AT1G51680 70.751 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03855 K01904 - gmx:547944 875.93