Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03854 ATGAGGCCGATTCAACTTCCACCTCCAACCGCCACCGGTTCAGCTTCCGCCACCGGTTCTCCAATCAACAATAACCGTCATCAGCGCCGCCGTAGAGACCTAACCCTTCCTCTTCCACAACGAGACACAAATCTAGCCGTTCCGCTTCCGCTGCCTCCTTCCGGCAGTGGAAGCGGCGGTAGCGGCAGCGGAGGAAGCGGAAACGGAAACAATAACAACGCTGGAGGAGGACAAGGATCGAGTCAACAACTAGTGATTCCGTTTTCCGAACTCGAACGGTTGAACCGGATCGGTAGCGGTTCCGGCGGAACGGTTTACAAGGTAGTTCACCGAACAACCGCTCGCGTTTACGCGCTTAAGGTGATATACGGACATCACGAAGAATCGGTTCGCCGTCAGATCCACAGAGAAATCCAGATCTTGCGAGACGTAGACGATCCAAACGTGGTGAAGTGTCACGAGATGTACGATCACAACGCCGAGATTCAAGTTCTGTTAGAACACATGGACGGTGGTTCACTCGAAGGAAAACACATCCCTCAAGAAAATCAACTTGCTGACGTGGCACGTCAGATCCTCCGTGGACTCGCTTATCTTCACCGCCGTCACATCGTTCACCGTGATATCAAACCGTCGAATCTGTTGATAAATTCGCGTAAACAGGTGAAGATCGCTGATTTCGGTGTAGGTAGGATTCTGAATCAAACGATGGATCCGTGCAATTCATCGGTTGGAACGATTGCGTATATGAGTCCGGAGAGGATTAACACCGATATCAACGACGGACAATACGATGCTTACGCCGGTGATATATGGAGTTTAGGTGTGAGTATATTGGAGTTTTATATGGGAAGGTTTCCATTTGCGGTTGGTAGACAAGGTGATTGGGCGAGTTTGATGTGTGCGATTTGTATGTCGCAACCACCAGAAGCTCCAACGAGTGCTTCGATGGAGTTTAGGGATTTCGTTTCAAGGTGTTTGCAGAGAGATCCATCGAGGAGATGGACTGCTTCCAGGTTGCTTTCGCATCCTTTTCTTGTTAGGACGGTTTCAAATCATAATCAGATTCCTCCAAATCTTCATCAACTACTTCCTCCTCCACCAAGGCCTCTTTCTTCTTAA 1122 0.4938 MRPIQLPPPTATGSASATGSPINNNRHQRRRRDLTLPLPQRDTNLAVPLPLPPSGSGSGGSGSGGSGNGNNNNAGGGQGSSQQLVIPFSELERLNRIGSGSGGTVYKVVHRTTARVYALKVIYGHHEESVRRQIHREIQILRDVDDPNVVKCHEMYDHNAEIQVLLEHMDGGSLEGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTSASMEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRTVSNHNQIPPNLHQLLPPPPRPLSS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03854 373 ProSiteProfiles Protein kinase domain profile. 91 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03854 373 Pfam Protein kinase domain 92 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03854 373 SUPERFAMILY Protein kinase-like (PK-like) 88 368 IPR011009 -
Car06g03854 373 MobiDBLite consensus disorder prediction 9 24 - -
Car06g03854 373 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 26 362 - -
Car06g03854 373 CDD PKc_MAPKK_plant_like 89 346 - -
Car06g03854 373 Gene3D Phosphorylase Kinase; domain 1 73 170 - -
Car06g03854 373 Gene3D Transferase(Phosphotransferase) domain 1 172 358 - -
Car06g03854 373 SMART serkin_6 91 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03854 373 MobiDBLite consensus disorder prediction 1 81 - -
Car06g03854 373 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Car06g03854 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Car06g03854 373 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 26 362 - -
Car06g03854 373 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03854 Car-Chr6 70323817 70325873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03854 1 362 MAP Kinase Kinase Gene Family AT1G51660 68.232 8.41e-169 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Car06g03854 Pkinase 1.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03854 K13413 - gmx:100818488 580.096