Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03842 ATGGAAACCAAAGACAACAACAACATTGAAGCTACAAGAAAGTTCTTAACTTCTACCTTAGAAACATCAAAAGCTATTGCTTCTTCATTAGATGAATCTGGTTCAAGATTGAAGCTTCTTAACAAAAAATGTTTATCATTGCAAACTTCACTTAAACTCATCTCAATGCAAAGTTTTTCATTTTGTGATGTTGAAAATGAAAAAGTCTTAAGAATATTGCAAGAATTGCAAGCCATAGAAGACGGTGCGCGCCTCGACCGAGGAATTCTTAGTATTGCTCTTGACAAACTTGAGATTTCTTTTCACAAACTTTTAATGTCAAACACTATGCCTCTTCCTTTGGTTTCACTAATTGATCAGCCAAATATCATTGAAAAACAAGGTTTTCCGTTTCCGAGTTCTTTAACAAGTAAGTTTCAAGTCATCGCCGAGAGATTAAATGCTAACAACAGGCTAGACAAGTGTCAATCTATGTATGTTGAAGTTCGAGGTATGAATGCGCGACGAAGTTTGAAGACTATTGATTTAAGCTACCTTGAGATTCCGATATCTGAGTTTGAGGATGCACATGGAATAGAGAGTTGCATAGAGCAATGGAGTATTCATTTGGAGTTGGTTGTGGAGAAACTTCTTGAGGTTGAGTTTATGCTCTCTTCAATAATCTTCGAGAAAATCAGTCCAGAAGCATCGATGAAATGTTTTGCAAAGATTGCGATTGAATCGGGAATTTTTTCCTTTATAAAATTTGGAAAATTTGTTAGTGAGAGGAAAAATGAGCCTTTGAAGCTGTTGAATTTGTTGTCTATGTTTAGAGTTTTGAATGGTTTAAGACTAAAATTCAATAAACTTTTTAGAGGTGAAGCTTGTGAAGAAATTAGAATTGTGATAAAGGATCTTATTACAAGAGTTGTGAATTGTGCTAGTGATATTTTCTTCCAACTTTCAGAACAAGTGAAGTTGCAAAGACCATCTTGTCCTCCCTCAGATGGAAGTGTTCCTAGGTTGGTAAGTTTTGTCACTAATTATTGCAATAAGCTTCTTAGTGATGAGTATAAGCCACATTTGATACAAGTTTTGGAAATTCATCTTAGTTGGAAAAAGGAACTATATGAAGAGGGTATTTTTTGGACTCAAATATATAGCATAATTAAGGAAGTTGCATTAAATTTAGATGTTTGGTCAAAAGCCTATGAAGATATCACTTTGTCTTATTTTTTTATGATGAATAATCATTGTCATTTCTATAATTTAAAGGGTACTTTAGTTGGAAATATGATGGGAGATTCTTGGTTAAAAGCACATGAACAATATAAAGAGTATTATGCATCACTTTATTTGAGGAATAGTTGGGGAAATCTTCAAAATATTCTTGTTGTTCAAAAGGACATAGTTTCATCTTCTATGATTTTTGAAGATTTGGCTAAGAGACTAAAGACTTTCAATCTAGCTTTTGATGAAAGGTACAAAAAGGAATGTAAATGGATAATCATTGATGAAATATTAAGGGAAAATATATGCAAGCATTTAGTGGAAGGTATTGTACCAATTTATAAGGTGTACTTGAAGAATTACATTTTGTGTGTTGAAAGTGATGATGGTGTGGTTGATAAGCATATTATTAAATATACAGCAAAGGGTTTGGAGAATAAGATTTGGTCATTGTTTCAACCAAAGATGAGGAAACATGGTGATAGCATTAAACACAAAGATTTGATTAGTAAAATAAAAGAAGTGAGTCATCATTTTCGGTTGAGTTTAGTTGCTTTATAG 1770 0.3271 METKDNNNIEATRKFLTSTLETSKAIASSLDESGSRLKLLNKKCLSLQTSLKLISMQSFSFCDVENEKVLRILQELQAIEDGARLDRGILSIALDKLEISFHKLLMSNTMPLPLVSLIDQPNIIEKQGFPFPSSLTSKFQVIAERLNANNRLDKCQSMYVEVRGMNARRSLKTIDLSYLEIPISEFEDAHGIESCIEQWSIHLELVVEKLLEVEFMLSSIIFEKISPEASMKCFAKIAIESGIFSFIKFGKFVSERKNEPLKLLNLLSMFRVLNGLRLKFNKLFRGEACEEIRIVIKDLITRVVNCASDIFFQLSEQVKLQRPSCPPSDGSVPRLVSFVTNYCNKLLSDEYKPHLIQVLEIHLSWKKELYEEGIFWTQIYSIIKEVALNLDVWSKAYEDITLSYFFMMNNHCHFYNLKGTLVGNMMGDSWLKAHEQYKEYYASLYLRNSWGNLQNILVVQKDIVSSSMIFEDLAKRLKTFNLAFDERYKKECKWIIIDEILRENICKHLVEGIVPIYKVYLKNYILCVESDDGVVDKHIIKYTAKGLENKIWSLFQPKMRKHGDSIKHKDLISKIKEVSHHFRLSLVAL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03842 589 Gene3D Exocyst complex component Exo70 62 562 - -
Car06g03842 589 Pfam Exo70 exocyst complex subunit 198 551 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car06g03842 589 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 66 IPR004140 GO:0000145|GO:0006887
Car06g03842 589 SUPERFAMILY Cullin repeat-like 83 555 IPR016159 -
Car06g03842 589 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 66 - -
Car06g03842 589 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 68 578 - -
Car06g03842 589 PANTHER EXOCYST COMPLEX PROTEIN EXO70 68 578 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03842 Car-Chr6 70144746 70146758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03842 67 563 EXO70 exocyst subunit family AT4G31540 47.461 3.69e-160 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03842 K07195 - gmx:100777662 709.523