Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03839 ATGGCCATTAAGAAATACTCCAACAAACTTCCTCAAAATGCAGTTTTGAAACAAATCCTTAAAAGATGTTCAAGCTTAGGAAAGAAAAACGAGTATGATCATAACCTTGATGTCCCTAAAGGTCATTTCCCTGTTTACGTTGGTGAGAATCGAAGTAGATATGTTGTTCCAATCTCTTTTTTGACTCACCCTGAGTTTCAATCCCTTCTTCGACAAGCTGAAGAGGAATTTGGCTTTGATCATGATATGGGTCTCACTATTCCTTGTGAAGAACTTGTTTTTCGATCCTTAACATCAATGATTCGATGA 309 0.3689 MAIKKYSNKLPQNAVLKQILKRCSSLGKKNEYDHNLDVPKGHFPVYVGENRSRYVVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEELVFRSLTSMIR 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03839 102 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 102 IPR003676 GO:0009733
Car06g03839 102 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 102 - -
Car06g03839 102 Pfam Auxin responsive protein 25 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03839 Car-Chr6 70126423 70127099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03839 37 102 Calmodulin-binding Proteins AT3G43120 51.515 2.28e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03839 K14488 - oeu:111410569 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03839 06 70126423 70127099 Car06g03839 06 70126423 70127099 ECH