Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03838 ATGGCCGCATCACAAACCCTATCTTCTTCCCTTTCCAAACCATCCCCTCTCCCTTTCCCTCTCACCAACGCTCGATTCTCCTCTAAACCTACTCTCCCTTTCCACCTCTCCGACATCCCCAAACCACTCTTCACCGTTTCCTCTAAAAACCCTATTTCCGACATCATTCTCTCAAATCATAACCAAAACAAAACATCCCTATCTCTCTCcgatgacgacgacgacgacgacAAACCTAGAGAAGAGTGCGGCGTCGTCGGTATTTACGGCGATTCTGAAGCTTCCCGTCTTTGCTACTTAGCCCTTCATGCTCTCCAGCACCGTGGTCAAGAAGGTGCCGGAATCGTTACTGTTAACGATAACGTCCTTCAATCAATCACTGGCGTTGGTTTAGTTTCCGATGTGTTCAACGAATCGAAACTCGATCAATTACCTGGAAGTTTAGCTATTGGCCATGTTCGTTACTCAACTGCTGGCCAATCCATGCTTAAAAATGTTCAACCTTTCGTTGCTGGGTACCGTTTTGGTTCTGTTGGGGTTGCTCACAATGGCAATTTGGTTAATTACCGAACTTTAAGGGCTAAACTTGAAGAAAAAGGTTCGATTTTTAATACTACTTCTGATACTGAAGTTGTTCTTCATTTGATTGCAACTTCAAAGCATAGACCTTTTATATTGAGGATTGTTGATGCATGTGAGAAGCTTGAAGGTGCTTATTCAATTGTGTTTGTTACTGAGGATAAACTTGTTGCTGTTAGGGATCCTTTTGGTTTTCGACCTTTGGTTATGGGTAGGAGAAGTAATGGTGCTGTTGTTTTTGCTTCTGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGGGAAGTGTTCCCTGGTGAAGTTATTGTGGTTGATAAAAATGGGATTCAATCACTTTGTCTCATGTCTCATCCACAACCAAAGCAATGTATCTTTGAGCATATTTACTTTGCTTTGCCTAATTCTGTTGTTTTTGGTAGGTCTGTTTACGAGTCTCGTAGACGTTTCGGGGAGATACTTGCTACCGAGAGTCCTGTTGATTGTGATGTTGTCATAGCTGTTCCTGACTCTGGTGTTGTTGCAGCACTTGGTTATGCTGCAAAAGCTGGTGTTCCTTTTCAGCAAGGGCTGATAAGGTCACACTATGTAGGAAGGACTTTCATTGAGCCATCTCAGAAAATTAGGGACTTTGGTGTGAAGTTGAAGCTTTCGCCGGTTCGTGCTGTACTTGAAGGTAAAAGGGTTGTGGTTGTTGATGATTCAATTGTGAGAGGAACAACCTCATCAAAGATTGTGAGGTTGCTTAAAGAAGCAGGTGCAAAAGAAGTTCACATGAGAATTGCAAGTCCTCCAATTATAGGGTCATGTTATTATGGTGTGGATACACCTAGCTCAGAGGAATTGATCTCTAATAGGATGAGTGTTGATGAAATAAACGAGTTTATTGGATCAGATTCACTTGCTTTTCTTCCATTTAATAGCTTGCATAATATGTTGGGTACTGACTCACCTAATTTTTGTTATGCTTGTTTCTCTGGGAAATACCCTGTTGAACCAAGAGAGCTTAAGGTTAAAAGGGTTGGTGATTTTGTTGATGATGGATTGAATGGAAGTTTGGAACAAATTGATGGTGGTTGGGTTCAAGCTAATAGAAATCAGAAAGAGGTGAATGCTGCTACTGGTCTTTGA 1713 0.4098 MAASQTLSSSLSKPSPLPFPLTNARFSSKPTLPFHLSDIPKPLFTVSSKNPISDIILSNHNQNKTSLSLSDDDDDDDKPREECGVVGIYGDSEASRLCYLALHALQHRGQEGAGIVTVNDNVLQSITGVGLVSDVFNESKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEEKGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVIVVDKNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRRFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVDEINEFIGSDSLAFLPFNSLHNMLGTDSPNFCYACFSGKYPVEPRELKVKRVGDFVDDGLNGSLEQIDGGWVQANRNQKEVNAATGL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03838 570 CDD PRTases_typeI 345 456 IPR000836 -
Car06g03838 570 TIGRFAM purF: amidophosphoribosyltransferase 83 524 IPR005854 GO:0004044|GO:0009113
Car06g03838 570 Hamap Amidophosphoribosyltransferase [purF]. 82 523 IPR005854 GO:0004044|GO:0009113
Car06g03838 570 Gene3D - 342 506 IPR029057 -
Car06g03838 570 Pfam Phosphoribosyl transferase domain 357 452 IPR000836 -
Car06g03838 570 SUPERFAMILY PRTase-like 318 529 IPR029057 -
Car06g03838 570 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 83 306 IPR029055 -
Car06g03838 570 CDD GPATase_N 83 333 IPR035584 -
Car06g03838 570 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 83 524 IPR029055 -
Car06g03838 570 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 25 555 - -
Car06g03838 570 MobiDBLite consensus disorder prediction 1 22 - -
Car06g03838 570 Pfam Glutamine amidotransferase domain 161 280 IPR017932 -
Car06g03838 570 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 25 555 - -
Car06g03838 570 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 83 302 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03838 Car-Chr6 70081164 70083363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03838 63 556 PRT Gene Family AT4G34740 84.848 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03838 K00764 - gmx:100791919 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03838 06 70081164 70083363 Car06g03838 06 70081164 70083363 ECH