Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03837 ATGGGAGATAATGAAGATAATGAAATGATGCAGAGGcttcattcttcttcttcttcttcttcttttctGCAACAACATACACTCAACAATCACATGGAACAGTTAAGCATACCGCAATTTAATCCTTCACAAATGCGTAGACATCAGAATCAGCATCAACAAAGAGCAGGTATACCACCTTCTCATCCACACCAGATCCCACCTATTTCACCATACTCTCAGATCCCGGTTTCACGGCCGCAATTAGCTTCACATAACACTAGTCCTACACCTTCCCACACTCGATCACTCTCCCAACCCTCTTTTTTCTCACTAGACTCTCTTCCACCTCTTAGCCCTTGTCCGTTTCGCGACTCTTCAACCACGGACCATGCTGACGTGTCAATGGAAGATCGTGACGTCACTTCTCACTCTCTCTTACCTCCTTCTTCTCCCTTTGCTCGTAACCCTTGCCGCGTTAACGATAATTCGCCGTTGCCTCCTCGGAAATCTCATCGCCGTTCCAACAGTGACATTCCGTTTGGATTTTCCACGGTGTTGCAATCTTCCCCGCCTCTTATTCCTCTTAGAGGAAGAGAAGTTGCCAAAACTTCTCCTTCTTCGGTGGTCAAAAGGGAAACAAGTTGGGACAGAAATGTTGATAATCATAATGTAGAGGGTTCTATTGAGAAGAAATCGCAATCACCTGAAGGTGAAGTTGTTGATGATCTTTTCTCTGCTTATATGAATTTGGATAACATTGATGCGATTAACTCTTCTGGAACTGATGACAAAAACGCTGCTACCGATAATCGCGATGATTTGGATAGTAGAGCTAGCGGAACCAAGACTAATGGAGGTGATAGTAGTGAAAATGAAGCTGAGAGTAGTGTTAATGAGAGTGGAGATAGTATGCAGAGGAAGGAAGGGATGAAGAGAAGTGCAGGAGGTGATATTGCGCCGACAACGAGACACTATAGGAGTGTGTCCATGGATAGTTTTATTGGAAAGTTGAATTTCAATGATGAGTCGTCCAAGCTTCCACCTTCACCTGGATTGATGTCTCCGGGGAATTCGGTTGATGGGAATTCAGCCGCAGCTTTTAGCTTGGAGTTTGGGAATGGTGAATTTAGTGGCCCGGAATTGAAGAAAATTATGGCTAATGAGAAACTTGCTGAAATTGCTATGGCTGATCCTAAACGTGCTAAGAGGATTTTGGCTAATAGGCAATCAGCTGCGCGGTCGAAAGAACGCAAGATGCGTTATATATCGGAACTAGAACATAAAGTTCAGACTCTGCAGACTGAAGCCACTACACTTTCTGCACAGCTTACTCTATTGCAGAGAGATTCTGTTGGACTTACCAACCAAAATAGTGAGTTGAAGTTCCGCCTTCAATCCATGGAACAACAAGCAAAACTCCGAGATGGTATTTCTGTCAATCTTTTCAATGTATCTTTATTCATGGATATGAGCAAAACATGCAACATTGTAACTCACTTTATGTTTCTGGATGAAAACTAA 1503 0.4238 MGDNEDNEMMQRLHSSSSSSSFLQQHTLNNHMEQLSIPQFNPSQMRRHQNQHQQRAGIPPSHPHQIPPISPYSQIPVSRPQLASHNTSPTPSHTRSLSQPSFFSLDSLPPLSPCPFRDSSTTDHADVSMEDRDVTSHSLLPPSSPFARNPCRVNDNSPLPPRKSHRRSNSDIPFGFSTVLQSSPPLIPLRGREVAKTSPSSVVKRETSWDRNVDNHNVEGSIEKKSQSPEGEVVDDLFSAYMNLDNIDAINSSGTDDKNAATDNRDDLDSRASGTKTNGGDSSENEAESSVNESGDSMQRKEGMKRSAGGDIAPTTRHYRSVSMDSFIGKLNFNDESSKLPPSPGLMSPGNSVDGNSAAAFSLEFGNGEFSGPELKKIMANEKLAEIAMADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDGISVNLFNVSLFMDMSKTCNIVTHFMFLDEN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03837 500 Pfam bZIP transcription factor 393 447 IPR004827 GO:0003700|GO:0006355
Car06g03837 500 Coils Coil 409 443 - -
Car06g03837 500 CDD bZIP_plant_RF2 394 443 IPR044759 GO:0003700|GO:0006355
Car06g03837 500 SUPERFAMILY Leucine zipper domain 393 444 IPR046347 GO:0003700|GO:0006355
Car06g03837 500 MobiDBLite consensus disorder prediction 207 231 - -
Car06g03837 500 MobiDBLite consensus disorder prediction 75 106 - -
Car06g03837 500 MobiDBLite consensus disorder prediction 192 231 - -
Car06g03837 500 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN 97 475 - -
Car06g03837 500 SMART brlzneu 389 453 IPR004827 GO:0003700|GO:0006355
Car06g03837 500 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 391 454 IPR004827 GO:0003700|GO:0006355
Car06g03837 500 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 97 475 - -
Car06g03837 500 MobiDBLite consensus disorder prediction 11 58 - -
Car06g03837 500 Gene3D - 392 445 - -
Car06g03837 500 MobiDBLite consensus disorder prediction 1 177 - -
Car06g03837 500 MobiDBLite consensus disorder prediction 249 317 - -
Car06g03837 500 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03837 Car-Chr6 70075687 70079253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03837 1 475 bZIP Transcription Factor Family AT4G38900 58.447 7.86e-166 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g03837 bZIP_1 7.1e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03837 - - mtr:MTR_4g072090 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03837 06 70075687 70079253 Car06g03837 06 70075687 70079253 ECH