Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03826 ATGAGTAGCATTCCAAATACAGACGATGGTCAGAAAATAGTCAAGCGCATTCGGTATGATCGCGAAACAGTCAAGCATAGTCAATCATTAGTATCCCAAGAAGAAGCTGATAATGGAGACAACACCGAAGAAGGAGGAAACATCGAAGAAGGAAGAGGAGATGGTAGTTTAAAAAAAGGTCCTGATAACAGAGACACCAAAGAAGGAGGAAGAGATGGTAATCTAACGAAAGGTCCATGGACATTGGCAGAAGATGCAATTTTGGTAGAATACGTTCAAAAGTATGGAGAGGGAAATTGGAGTGCAGTCCAGAAAATTTTTGGACTTGCTCGGTGTGGAAAAAGTTGTCGTCTGCGATGGAATAATCATTTGAGACCAGATCTGAGAAAATGTGCATTTACTGCAGAAGAAGAAAACTCAATTGTTGAGCTCCACTCTATATTGGGAAATAAATGGGCTCAAATCGCTCAAAAGTTGCCTGGACGTACAGACAATGAGATAAAGAACTATTGGCACACAAGAAGTAAGAGATTGAAAAAAGTTGGCTTACCAATCTATCCTGAAGAAGTAGAGCAAAGGGCGAAAAAGATAAATCAAGAACATGTCGACTTAATAGCCAACCAACACTGTGACGATGATTCACAAACAACAAACTTAAATATACTTGACGAGATATTTGAAAGTTACATACGCCATCCAGGTCCAATTCTTCTACCACCATCTGTTGATATACATGGAAGTGACTTGGTTGATCGGAGTATAGACTTCAATAGTAATAATGTTGTTGTTCCACAAATTGATCAGCGTAAAAATTACTCTATGGTGTCTCCTCCATGTGATCCATGCACCAGTAATCAGCTTCATGATAATTACATTATGTTGTTTCCTCCATGTGATTCATGCACCAACAATCAATTTCATGGTCTTTCATGTGATCTATGCACCAACAATCAGTTTCATGACAATTACTTTATGTTGTCTCCTCCATGTGATCCATGCACCAGCAATCAGTTTCATGGTCCTCCATGTGATCCATGCATCAGCAACCAGTGTCACGGTCCTCCATCTGATGCATGCACTAGCAATCAGTTTCATGATAATTACTTTATGTTGTCTCCTCCATGTGATTCATGCACCAACAATAAGTTTCATGGTCCTCCATGTGATCCATGCACCATCAATCAGTTTCATGAATATGATAATTACTCTATGTTGTCTCCTCTATGTGATTCATGCACCAACAATCAGTTTCATGGTCCTCCATGTGATCCATGCACCAACAATCAGTTTCACGGTCCTCCATGTGATCCATGCACCAACAATCAATTTCATGAATATAATAACCTTACTATAGATAGTCATGCCACATTAAATGACAATATCTCTTCTTCTGAACCCATATATGATGAGTCTACTACATATGAGCTCCCTTCATTCCAATGTTTGCATACTCAAAAATGTAATTTGAACACACCTGTGTCTCGAATTCCTCCACACGAGTCTATCGACACAGTGATTCAAATACCTCCAATTGAAGAACCTAAGAAGTCAATTATAGTTTATTCGGATAACGATGGTTTGCTCAATGCAAGAGCATTCCAAAATGGCTCAAATGTCCAAGATGGAATAGAACAAACGGCCCATGACGCAACATTCAAAGGCTCAAATGTACAAGAGGGAATAGAACAAACGGCGCATGATGAAGCACTCAAGATTTCAACTTATAATAGCATTTGTGCAGAATGGGATAAACTAGATGAACTAAAGTACAACCCATTCAATGAGTCTTTTGCAACATTTCAGTGTTCTGACCACAACAATCATCATACTAGCATCTGGCCAATCGATGAGATCCAGTCACTTGAAACCACTCAGAGTTAG 1881 0.3918 MSSIPNTDDGQKIVKRIRYDRETVKHSQSLVSQEEADNGDNTEEGGNIEEGRGDGSLKKGPDNRDTKEGGRDGNLTKGPWTLAEDAILVEYVQKYGEGNWSAVQKIFGLARCGKSCRLRWNNHLRPDLRKCAFTAEEENSIVELHSILGNKWAQIAQKLPGRTDNEIKNYWHTRSKRLKKVGLPIYPEEVEQRAKKINQEHVDLIANQHCDDDSQTTNLNILDEIFESYIRHPGPILLPPSVDIHGSDLVDRSIDFNSNNVVVPQIDQRKNYSMVSPPCDPCTSNQLHDNYIMLFPPCDSCTNNQFHGLSCDLCTNNQFHDNYFMLSPPCDPCTSNQFHGPPCDPCISNQCHGPPSDACTSNQFHDNYFMLSPPCDSCTNNKFHGPPCDPCTINQFHEYDNYSMLSPLCDSCTNNQFHGPPCDPCTNNQFHGPPCDPCTNNQFHEYNNLTIDSHATLNDNISSSEPIYDESTTYELPSFQCLHTQKCNLNTPVSRIPPHESIDTVIQIPPIEEPKKSIIVYSDNDGLLNARAFQNGSNVQDGIEQTAHDATFKGSNVQEGIEQTAHDEALKISTYNSICAEWDKLDELKYNPFNESFATFQCSDHNNHHTSIWPIDEIQSLETTQS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03826 626 Pfam Myb-like DNA-binding domain 132 173 IPR001005 -
Car06g03826 626 Pfam Myb-like DNA-binding domain 77 124 IPR001005 -
Car06g03826 626 CDD SANT 79 124 IPR001005 -
Car06g03826 626 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 62 353 - -
Car06g03826 626 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 358 600 - -
Car06g03826 626 ProSiteProfiles Myb-like domain profile. 72 124 IPR001005 -
Car06g03826 626 MobiDBLite consensus disorder prediction 45 72 - -
Car06g03826 626 Gene3D - 132 178 - -
Car06g03826 626 MobiDBLite consensus disorder prediction 1 77 - -
Car06g03826 626 SUPERFAMILY Homeodomain-like 75 171 IPR009057 -
Car06g03826 626 CDD SANT 132 173 IPR001005 -
Car06g03826 626 Gene3D - 76 129 - -
Car06g03826 626 ProSiteProfiles Myb-like domain profile. 125 175 IPR001005 -
Car06g03826 626 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 128 IPR017930 -
Car06g03826 626 SMART sant 129 177 IPR001005 -
Car06g03826 626 SMART sant 76 126 IPR001005 -
Car06g03826 626 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 358 600 - -
Car06g03826 626 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 62 353 - -
Car06g03826 626 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 179 IPR017930 -
Car06g03826 626 MobiDBLite consensus disorder prediction 11 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03826 Car-Chr6 69933512 69935632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03826 74 235 MYB Transcription Factor Family AT2G26960 50.282 1.15e-54 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car06g03826 Myb_DNA-binding 9.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03826 K09422 - cam:101502589 1342.79