Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03803 ATGCTTAATGGCGTGGTTCCTAAGGGAATAAAGAATCTGAAAGTTCTAAGCATTTTGAATCTTTCACGTAACAACATATCAGGATTCATCCCCGACGAGATTCGATTCATGACGAGCCTTACGACGTTGGATCTATCTTACAACAATTTCAGCGGAGTTGTTCCCACTGGCGGTCAGTTTTTAGTCTTCAACGACAGGTCCTTCGCCAGAAACCCTAACCTCTGTTTCCCACACCAATCCTCATGCTCTTCCATGCTCTACCCTTCGAGAAAAAGCCACACGAAGGGGAGACTCATCGTAATAGTGATAGCCTTCGTGACGGCGGTGTTACTTGTGTTGGTGACGGTGCACATGACAAGGAAGAGGAAGCTCCAGAATTCAAAGGCGTGGAAGTTAACGGCGTTTCAGAGGTTAGATTTCAAAGCAGAGGAAGTTGTGGAGTGTTTGAAAGAAGAGAACATAATAGGAAAAGGAGGAGCTGGGATTGTGTACAGAGGGTCCATGGTAAACGGAACTGACGTGGCGATAAAGCGTTTAGTTGGACAAGGAAGTGGGAGAAACGATTACGGATTCAAGGCGGAGATAGAGACGCTTGGTAGGATAAGGCACCGAAACATTATGAGGCTTTTGGGATACGTTTCTAATAAGGATACAAATTTGTTGTTGTATGAGTACATGCCTAACGGTAGTTTGGGGGAATGGCTTCATGGTGCAAAAGGTGGACACTTGAGTTGGGAAATGAGGTATAAAATTGCTGTCGAAGCTGCTAAGGGACTTTGCTATTTGCACCATGATTGTTCACCTCTTATTATTCATAGGGATGTTAAGTCTAATAATATTTTGCTTGATGCTGATTTTGAGGCCCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTATGACCCAGGAGCTTCTCAGTCTATGTCCTCTATTGCTGGCTCCTACGGTTACATTGCTCCAGAGTATGCTTACACGCTGAAAGTGGACGAGAAAAGTGATGTGTATAGCTTTGGAGTTGTGCTGTTGGAGCTTATCATAGGAAGGAAGCCAGTGGGTGAGTTTGGAGATGGGGTAGACATCGTTGGATGGGTCAATAAAACTGAATTAGAACTTTATCAGCCGTCCGATAAAGCATTAGTGTCGGCGGTGGTGGACCCGCGACTCACTGGATACCCTTTGACGTGTGTCATCCACATGTTCAACATAGCTATGATGTGTGTCAAAGAAATGGGCCCCGCAAGACCTACCATGAGAGAAGTTGTTCATATGCTCACCAATCTTCCCCACTCTACCACTCACAACTTAATTAATCTCTAA 1317 0.4465 MLNGVVPKGIKNLKVLSILNLSRNNISGFIPDEIRFMTSLTTLDLSYNNFSGVVPTGGQFLVFNDRSFARNPNLCFPHQSSCSSMLYPSRKSHTKGRLIVIVIAFVTAVLLVLVTVHMTRKRKLQNSKAWKLTAFQRLDFKAEEVVECLKEENIIGKGGAGIVYRGSMVNGTDVAIKRLVGQGSGRNDYGFKAEIETLGRIRHRNIMRLLGYVSNKDTNLLLYEYMPNGSLGEWLHGAKGGHLSWEMRYKIAVEAAKGLCYLHHDCSPLIIHRDVKSNNILLDADFEAHVADFGLAKFLYDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIIGRKPVGEFGDGVDIVGWVNKTELELYQPSDKALVSAVVDPRLTGYPLTCVIHMFNIAMMCVKEMGPARPTMREVVHMLTNLPHSTTHNLINL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03803 438 Pfam Protein tyrosine and serine/threonine kinase 150 424 IPR001245 GO:0004672|GO:0006468
Car06g03803 438 SUPERFAMILY L domain-like 3 74 - -
Car06g03803 438 Pfam Leucine rich repeat 7 50 IPR001611 GO:0005515
Car06g03803 438 ProSiteProfiles Protein kinase domain profile. 149 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03803 438 SUPERFAMILY Protein kinase-like (PK-like) 141 424 IPR011009 -
Car06g03803 438 Gene3D Phosphorylase Kinase; domain 1 113 225 - -
Car06g03803 438 Gene3D Transferase(Phosphotransferase) domain 1 226 436 - -
Car06g03803 438 PANTHER RECEPTOR-LIKE PROTEIN 55 2 431 - -
Car06g03803 438 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1-LIKE 2 431 - -
Car06g03803 438 SMART serkin_6 149 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03803 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672|GO:0006468
Car06g03803 438 Gene3D Ribonuclease Inhibitor 1 85 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03803 Car-Chr6 69726105 69728023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03803 2 55 Receptor kinase-like Gene Family AT1G75820 44.444 4.82e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car06g03803 PK_Tyr_Ser-Thr 6.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03803 K00924 - gmx:732625 705.671