Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03800 ATGGCTTCATCAAGTGGAACATCTTCAGGGTCAACTTTGCTGCAGAATTCTGGTTCAGAAGAGGATTTACAGGTGTTGATGGATCAGAGGAAGAGgaagaggatgatatcgaatcgagaatcggctagacggtctcggatgaggaaacagaagcaCTTGGATGATCTTGTGTCTCAAGTGGCTAAGCTGAGGAAGGAGAATCAAGAGATACTCACAAGTGTTAACATCACAACTCAAAGGTGTTTGAGTGTTGAGGCTGAGAATTCTGTGTTGAGGGCTCAGATGACTGAGTTGAGCAATAGGTTGGAATCTTTGAATGAGATTGTTGGTGTTTTTAATGCAAGCAATGGAGTTTTTGGAACTGCATCAACCACTTTTGTTGAGCCAAATAATAGCTTCTTCTTTAATCCTTTGAATATGTCTTATTTGATGAACCAGCCTATTATGGCTTCTGCAGACATATTGCAATATTGA 474 0.3481 MASSSGTSSGSTLLQNSGSEEDLQVLMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAKLRKENQEILTSVNITTQRCLSVEAENSVLRAQMTELSNRLESLNEIVGVFNASNGVFGTASTTFVEPNNSFFFNPLNMSYLMNQPIMASADILQY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03800 157 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Car06g03800 157 MobiDBLite consensus disorder prediction 1 48 - -
Car06g03800 157 Coils Coil 88 108 - -
Car06g03800 157 MobiDBLite consensus disorder prediction 24 48 - -
Car06g03800 157 PANTHER BZIP TRANSCRIPTION FACTOR 1 155 - -
Car06g03800 157 MobiDBLite consensus disorder prediction 1 23 - -
Car06g03800 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Car06g03800 157 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Car06g03800 157 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Car06g03800 157 Coils Coil 46 73 - -
Car06g03800 157 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 155 - -
Car06g03800 157 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Car06g03800 157 Gene3D - 28 82 - -
Car06g03800 157 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03800 Car-Chr6 69700889 69702261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03800 26 157 bZIP Transcription Factor Family AT4G34590 61.314 4.97e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g03800 bZIP_1 1.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03800 K25786 - gmx:100101862 226.483