Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03777 ATGTTACACTGTCTCAACACTTCTGCGAATCTTGGAGGAGGAGCAACCGTTTCGGATATGACAGTGTTGGAAAGACAAAGAGCAAGAAGAAAGTGGCaacatgaacatgaacatgaacatgaacaAGAGCAAGATTACCATGGTTACTTTTGCGGAAATGGATTCTCTTCTTCACATCAAATTATGATGGTTAATGGCTGTGATTCTGCTCTCGATGAGGTGGTAGTTAACACTAAGAAAAGAAAAGCTATGAATTCAAAGGTTGTTGTTGTTGCGGAGGAAAGTGATGATGATAACAAAGACAAGAGGATCAAAGTGAGTGCAGAGGAAGAAGATGAATCTAAAATTACGGAGCAAACAAAGGGACACAAGACTACAAAATTCAACAAAAACAACAGGGAAAATTCTGCTCAGACTTCCAAGGAAAATTCAAAAGTTTCTGAGAATCAAAATCAAAAGCTTGATTACATTCATGTTCGTGCACGTCGTGGTCAAGCCACTGATAGTCATAGCTTAGCTGAAAGAGTTAGAAGGGAAAAAATAAGTGAGAGAATGAAGTATTTGCAAGATTTAGTGCCAGGATGCAACAAAATTGCAGGCAAAGCTGGAATGCTTGATGAAATCATTAACTATGTTCAGTCTCTTCAACGACAAGTTGAGTTCTTATCAATGAAATTAGCTGCTGTAAACCCAAGACTTGATTTCAACATTGATGAATTATTTGCCAAAGAGGTTTTTCCTCAAAATTTTCCAAGCATAGGGATGCAATCAGACATGGCAAATCCTTCATATCTTAACTTCAATTCAAGCCAACAACTAGTTTCATCACTTTCATATTGTGGTGGAATAATAAACAATATCGGACTAATGCCTCCGGATATCGACATTAGAAGGAACATTAATGCCCCTGCATCTTTACCTGAAATGTTTGTTGACTCATCATGTTTCACTCATATTCTACCCTCCTCAACTTTGGAAGGTGATTTCCAAAACCTTCACAATGTGATTTTTGATCAAGGACGATCAACATCATTTCCTTCTCAGCCATTTACAGGTTTGATTGAAGCTAGTAATCTGAAGATGGAAATGTAA 1092 0.3663 MLHCLNTSANLGGGATVSDMTVLERQRARRKWQHEHEHEHEQEQDYHGYFCGNGFSSSHQIMMVNGCDSALDEVVVNTKKRKAMNSKVVVVAEESDDDNKDKRIKVSAEEEDESKITEQTKGHKTTKFNKNNRENSAQTSKENSKVSENQNQKLDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNIDELFAKEVFPQNFPSIGMQSDMANPSYLNFNSSQQLVSSLSYCGGIINNIGLMPPDIDIRRNINAPASLPEMFVDSSCFTHILPSSTLEGDFQNLHNVIFDQGRSTSFPSQPFTGLIEASNLKMEM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03777 363 MobiDBLite consensus disorder prediction 131 150 - -
Car06g03777 363 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 77 343 - -
Car06g03777 363 Gene3D - 162 236 IPR036638 GO:0046983
Car06g03777 363 MobiDBLite consensus disorder prediction 91 130 - -
Car06g03777 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 215 IPR011598 GO:0046983
Car06g03777 363 MobiDBLite consensus disorder prediction 91 150 - -
Car06g03777 363 Pfam Helix-loop-helix DNA-binding domain 169 216 IPR011598 GO:0046983
Car06g03777 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 234 IPR036638 GO:0046983
Car06g03777 363 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 77 343 IPR024097 GO:0006355
Car06g03777 363 CDD bHLH_AtBPE_like 155 240 - -
Car06g03777 363 SMART finulus 171 221 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03777 Car-Chr6 69480396 69483177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03777 19 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 41.946 8.28e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car06g03777 HLH 3.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03777 - - gsj:114373950 426.402