Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03773 ATGCTTCTTCCATGTCAAAAATACACTCTTTATCTTCCTTGTTCTTCTATTCACACCTCCAAAAACCCAAAACCCACCACCATTTTCAATTGCCAAAACCCAAACGAACAACACCACCCTAGAAAACACAACTCCAAATCCACATCGTTTCTTATTCACCACCTCTCACACAAACACAGCGAAAACCACACTTCACCCTCTGAACTACAAGACCCAACACCGCACGACGAAAAAGTGAAGCTTTTGGAGCTTGCTCTTGTAAGAAAAAGAACCCCACAATTTCCCGGTTCCATCTACGCTCAATCGCCTAGCGACCCTGATGTGGGTTCTTCTCTTCCACCTCTTAAAACCCTTTTTCGATCTTGTCATGAAGAAGAAGAGGTGATGATTATGCAAGCTCTTGAAATTCGTAGGAAGGTTACTGAAGAGGTTTTTAAAGAAGCCATGCGAAAGGGTAAATTTGGAATTACGTATACTACCAATTTGGTTTCTAGGTTGGGTGGTTTCATTGATTATGTTATGATTGAAGCTGCTAATTTGAAAAGATTGCCTGAATATTCTCATTCCACTTTCAATTTACGCGCCAAAACTGTCATCGATGATTCTCAAGTTGTGCCACTTATCAGATGGTTGAAGCATAATTCTCTATCGTATCCTCAGATAGCTAAGCTCATTTTGTTGTCAAGAGGGAAACTTGAGTCCATAAGGAACCGTGTAGAGTGGTTGAAAACGGTGCGCGTTAAGGGAGACTTTATTGGAGATGCAATGTTGAAGGGTGGAGATAATGTTGTGCTGCGGAGCGATAGGGAGCTGGATGAGATTGTTGAGTATTTAGAGTCCAATGGAGTTAGGAGGGATTGGATGGGTTATGTTTTGAGTCGGTGTCCTAAGTTGTTGTCTTACGGATTCGAAGAAGTGAAGACTCGTGTGAAGTTCTATCTGGATATGGGTTTAGATGAGAAGGATTTTGGCACCATGGTTTTTGATTTTCCTAAAGTACTTGGTTACTATTCTCTTGAAGAAATGAACCAAAAGGTTGATTACTTGAAAGAATTTGGGCTTGAAAGTAAGGATGTCGGTAAGTTGCTTGCATTTAGGCCACAATTGATGGCGTGCAGCATTGAAGAACAATGGAAACCTCTTGTTAAGTATCTGTACTATTACGGGATTACCCGAGATGGAATGAGGAGAATGCTTACCATTAAACCAATGGTCTTTTGTGTTGACTTGGAGATGACTATTGTGCCAAAGGTAAAGTTTTTTCAAGACATAGGGGTTCGAAATGACGGGATTGCCAACATGCTTGTAAAATTTCCTACTCTACTCACTTACAGCCTGTACAAGAAGATTAGGCCTGTGGTCATATTCTTGATGACCAAGGCTGGAGTCACTGAAAGCAATATTGGAAAGGTCGTAGCTCTTGGACCTGAGCTCTTGGGATGCAGCATAGTACATAAGCTCGAAGTAAATTTAAAATATTATTTGTCTCTTGGCATACGCCTTCGGCAACTGGGTGAAATGATCGCTGATTTCCCAATGCTGCTCAGATACAATATAGATGTTCTTCGTCCTAAGTATGTATATTTGCGGAAAACCATGGTCCGAACTTTGCAAGATCTTATTGAGTTTCCGAGCAGGTTTTTCAGTTATTCTCTTGAGGGTCGAATCATCCCAAGACACAAGGTTCTGGTGGAGAATCAGATTAATGTCAAGCTAAAATCCATGTTAGCTTGCACAGATGAAGAATTTAACAAAATGGTCAGGGATATGATTAGAAAACGCCACAAATTTCAATCCGCTACAGCAAAGGACAATACTACTCATCCTCAATCTCTCATTACCGGCAATATTTTACACCCTTGA 1863 0.4079 MLLPCQKYTLYLPCSSIHTSKNPKPTTIFNCQNPNEQHHPRKHNSKSTSFLIHHLSHKHSENHTSPSELQDPTPHDEKVKLLELALVRKRTPQFPGSIYAQSPSDPDVGSSLPPLKTLFRSCHEEEEVMIMQALEIRRKVTEEVFKEAMRKGKFGITYTTNLVSRLGGFIDYVMIEAANLKRLPEYSHSTFNLRAKTVIDDSQVVPLIRWLKHNSLSYPQIAKLILLSRGKLESIRNRVEWLKTVRVKGDFIGDAMLKGGDNVVLRSDRELDEIVEYLESNGVRRDWMGYVLSRCPKLLSYGFEEVKTRVKFYLDMGLDEKDFGTMVFDFPKVLGYYSLEEMNQKVDYLKEFGLESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVDLEMTIVPKVKFFQDIGVRNDGIANMLVKFPTLLTYSLYKKIRPVVIFLMTKAGVTESNIGKVVALGPELLGCSIVHKLEVNLKYYLSLGIRLRQLGEMIADFPMLLRYNIDVLRPKYVYLRKTMVRTLQDLIEFPSRFFSYSLEGRIIPRHKVLVENQINVKLKSMLACTDEEFNKMVRDMIRKRHKFQSATAKDNTTHPQSLITGNILHP 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03773 620 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 60 606 - -
Car06g03773 620 Gene3D Transcription termination factor 3, mitochondrial 361 597 IPR038538 -
Car06g03773 620 Pfam mTERF 227 411 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 Pfam mTERF 355 583 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 PANTHER CGI-12 PROTEIN-RELATED 60 606 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 MobiDBLite consensus disorder prediction 25 47 - -
Car06g03773 620 SMART mt_12 432 464 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 SMART mt_12 396 427 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 SMART mt_12 324 355 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 SMART mt_12 538 569 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 SMART mt_12 505 535 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 SMART mt_12 289 319 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 SMART mt_12 360 391 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 SMART mt_12 469 500 IPR003690 GO:0003690|GO:0006355
Car06g03773 620 Coils Coil 131 151 - -
Car06g03773 620 MobiDBLite consensus disorder prediction 598 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03773 Car-Chr6 69388392 69392406 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Car06g03773 mTERF 1.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03773 K15032 - mnt:21401514 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03773 06 69388392 69392406 Car06g03773 06 69388392 69392406 ECH