Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03734 ATGGAGCTTCTCCCCTCCGACGATTCTCCGCCGGAAACTCGAGAAATTCCCGAAGACCACAACAACACCCCGGACGAATCCCCGGACCCCGCCGGAATCGACGAAGGAGCGACTCTCGATGTATCGGGAAAGAATTTGGAGTTTCCGGCGCCGGAGAATTCCAAAGACGATACCGCGGAGAGTTTATACATTTACAAGAACGTTTACAGTTTGATTCCGAAGTCGGTGGGTGGTCTCGTCCGGTTGAAAACGCTGAAATTCTTTGGAAATGAGATTAACTTGTTCGCACCGGAGTTTGAGAACATGACGAGGTTAGAGCGGTTGCAGATGAAGGTATCTTCGCCTGGAATTGGTGGGTTGCCATTGCACAAATTGAAAGGTTTGAAAGAGCTTGAGCTTTCCAAAGGCCCTTCAAGGCCTTCTGCATTTCCCATATTGACTGAGATTTCTGCTCTCAAGTGCTTGACCAAGCTTTGCATTTGCCACTTCTCTATTAGATACCTTCCTCCGGAAATTGGGTGTTTAACGAAACTGGAGTATCTTGATATTTCATTCAATAAAATGAAGACACTGCCATCAGAGATTAGTTCTTTGAAAGTATTAATATCTATGAAAGTTGCGAATAATAAGTTGGTGGAACTACCGTCAGCTATGACCTTACTAACAAGGTTGGAGAGTTTGGACCTGTCAAATAATAGGTTGACTTCATTAGGATCCCTTGAACTTAGCTCAATGCATAGACTTCAGAACTTAAATCTTCAGTACAACAAGCTGCCCGGTAATTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGGAGATATATGCAAAGACAATTGTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAATTTACCGGAAAATGAGGAAACCTTTTCTCATGGACCTCATAACACCTCATCAAGCGTATTAACAAACCCCACATCTAGTAGTAGATGTTTTGCAGCCTGGAAATCGGAAACTGTATCAGACAATGGGAGCGTGGAAGAAAATAATAAAAAATTATTCTCTGAAGAAGCAGCAGACAACAATTTAATTGATAATGTCAACTATGATGAGGTAATTATTGAAAAGCAGTTTTCTCAGGAAGATTGCTGCACTGCAGAAAGTAAAGATGAAAGTGATGCGTGCTCATGTTCCTTAGAGAACGGGCAAAGCGAACAGGATGGAGACTCATGTTCAGATTTTTCGAAGTGTTGTTCTAAATCAAAGAGGCAATCTGATCATGATCTTAATAATCCTAAACCCTGCAAGTCTAGAAAACCGGTTGGTGATGGCTCAATATTGTCTTACAAGTACAGTAAAAATTCATTTTGTGGCACTGAGGACCATCTATTAGATGGCTTTTATGATGCGGGACGTGATCGACCGTTTTTGCCTCTTGAGAGTTATGAGCAAAATCAGTGTTTTGCTTCTCGCGAAGTCATCTTGATAGACAGACAAAGGGATGAAGAGTTGGATGCTGTTATGCTTTCTGCTCAGGCACTGGTCTCTAATTTGAAGCAATTAAATGGTTTGAACACGCCTGGGAGTCGGGGTGAAGTTGATAAATTGCAGACAGCATCACTACTAGCACTCTTTGTATCTGACCACTTTGGCGGGAGTGATAGAGGGGCTATTATAGAAAGGACACGTAAATCTGTTTCTGGTTCAAACTATAATAAGCCTTTTGTGTGTACATGTTCTGCTGGAAGCAGCACGAGTATAAATGCTTCAACTGAACCGGTTGTAAATGCCATTGAAGATATTAATCTTTCTAAGATCTCTGAAAAATCTATTGATTCTATAAAAAAAAAGCGAAATTCAATCATTGTTCCAATTGGTTCTGTTCAGTATGGTGTATGTAGGCATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCACCCGTACCTTGTGAGCTTGTTAGGGGTTACCTTGATTTTTCACCTCATGCCTGGAATGTCGTTTTGATAAAGAGGGGTGTTGCATGGGTTCGAATGCTTGTTGATGCATGCCGACCCCATGATATTAGAGAAGAGAAAGATCCAGAATATTTCTCTAGGTACATACCTCTTAGTCGAACTGAAATTCCTCTTTCGACTAGCAGTCTTCCTAGTTCTGATAATTGCTTTCCATCTCTCTCTACTTGTGATGAACTTGAGAAAAAAACTTTGACTACATTAGTTCGGTGCAAATTTGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGTACAGGAGAGTTCAGCAGACAAAATAAAAAACTTTGAATATAATTCTTTGGGAGAAATCAGAATTCTCGGTGTTTTGAAACACCCTTGCATAGTGGAAATGTATGGACACCAAATATCATGCAAATGGACTATCTCAGCTGATGGTAATCCTGAGCATCGTGTGTTGAGATCTGCAATTTTTATGGAAAACGTGGAAGGAGGCTCCTTAAAAACCTACCTAGAGGAATTATCAAAAGCTGGTGAAAAGCAGATTCCTGTGGAGTTGGCCTTGTGCATTGCCAAAGATGTCTCGTGTGCTTTGTCAGAGCTGCATTCGAAGCACATAATTCATCGTGACATAAAAAGTGAAAACATTCTGTTTGATCGTGATAGGAAGAGAGATGATGGAACACCCACTGTGAAGCTCTGTGATTTTGACAGTGCAGTGCCACTAAGATCCCCTTTACATGCATGCTGTATTGCTCATGTGGGAACACCTCCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCTCCAGAGGTCATGCGGACTATGTATAAGAAAAACACTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTTCTGGAGATGCTGACTTTGCGATTTCCATATTTTGGAGTACCTGATTCACACGTCCATGATAGTCTGCAGATGGGTAAACGACCACAACTAACTGATGAGCTCGAGGCATTGAGTTCAATGAATGAACCCACAATGATTCAATCCGGTGAAGAGCTGGAAAAATCAGATGCAGAGAGAGAATCGTTGAAGTTCCTTGTTGATTTGTTTCATAGGTGTGTAGAAGAAAATCCAAATGAACGACCTACAGCCGAAGAAATCCATGAAATGCTGCTTGGACACACAAGTCGTGCACAAGTTCAAGAT 3162 0.4133 MELLPSDDSPPETREIPEDHNNTPDESPDPAGIDEGATLDVSGKNLEFPAPENSKDDTAESLYIYKNVYSLIPKSVGGLVRLKTLKFFGNEINLFAPEFENMTRLERLQMKVSSPGIGGLPLHKLKGLKELELSKGPSRPSAFPILTEISALKCLTKLCICHFSIRYLPPEIGCLTKLEYLDISFNKMKTLPSEISSLKVLISMKVANNKLVELPSAMTLLTRLESLDLSNNRLTSLGSLELSSMHRLQNLNLQYNKLPGNFQIPSWICCNMEGNGDICKDNCSSSSVEMDVYESNLPENEETFSHGPHNTSSSVLTNPTSSSRCFAAWKSETVSDNGSVEENNKKLFSEEAADNNLIDNVNYDEVIIEKQFSQEDCCTAESKDESDACSCSLENGQSEQDGDSCSDFSKCCSKSKRQSDHDLNNPKPCKSRKPVGDGSILSYKYSKNSFCGTEDHLLDGFYDAGRDRPFLPLESYEQNQCFASREVILIDRQRDEELDAVMLSAQALVSNLKQLNGLNTPGSRGEVDKLQTASLLALFVSDHFGGSDRGAIIERTRKSVSGSNYNKPFVCTCSAGSSTSINASTEPVVNAIEDINLSKISEKSIDSIKKKRNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVRGYLDFSPHAWNVVLIKRGVAWVRMLVDACRPHDIREEKDPEYFSRYIPLSRTEIPLSTSSLPSSDNCFPSLSTCDELEKKTLTTLVRCKFGSVEAAAKVRTLEVQESSADKIKNFEYNSLGEIRILGVLKHPCIVEMYGHQISCKWTISADGNPEHRVLRSAIFMENVEGGSLKTYLEELSKAGEKQIPVELALCIAKDVSCALSELHSKHIIHRDIKSENILFDRDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAHVGTPPPCVCVGTPRWMAPEVMRTMYKKNTYGLEADIWSFGCLLLEMLTLRFPYFGVPDSHVHDSLQMGKRPQLTDELEALSSMNEPTMIQSGEELEKSDAERESLKFLVDLFHRCVEENPNERPTAEEIHEMLLGHTSRAQVQD 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03734 1054 Pfam Leucine Rich repeats (2 copies) 222 260 IPR025875 -
Car06g03734 1054 SUPERFAMILY L domain-like 58 271 - -
Car06g03734 1054 Gene3D Ribonuclease Inhibitor 31 295 IPR032675 -
Car06g03734 1054 Pfam Ethylene-responsive protein kinase Le-CTR1 597 678 - -
Car06g03734 1054 SMART serkin_6 730 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03734 1054 PRINTS Leucine-rich repeat signature 178 191 - -
Car06g03734 1054 PRINTS Leucine-rich repeat signature 221 234 - -
Car06g03734 1054 SMART LRR_sd22_2 175 197 - -
Car06g03734 1054 SMART LRR_sd22_2 221 242 - -
Car06g03734 1054 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Car06g03734 1054 ProSitePatterns Serine/Threonine protein kinases active-site signature. 863 875 IPR008271 GO:0004672|GO:0006468
Car06g03734 1054 Gene3D Transferase(Phosphotransferase) domain 1 723 1053 - -
Car06g03734 1054 SMART LRR_typ_2 221 244 IPR003591 -
Car06g03734 1054 SMART LRR_typ_2 245 271 IPR003591 -
Car06g03734 1054 SMART LRR_typ_2 79 101 IPR003591 -
Car06g03734 1054 SMART LRR_typ_2 175 198 IPR003591 -
Car06g03734 1054 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 400 1048 - -
Car06g03734 1054 ProSiteProfiles Protein kinase domain profile. 730 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03734 1054 SMART LRR_bac_2 198 217 - -
Car06g03734 1054 SMART LRR_bac_2 221 240 - -
Car06g03734 1054 SMART LRR_bac_2 175 194 - -
Car06g03734 1054 MobiDBLite consensus disorder prediction 299 320 - -
Car06g03734 1054 SUPERFAMILY Cysteine proteinases 623 681 IPR038765 -
Car06g03734 1054 MobiDBLite consensus disorder prediction 415 434 - -
Car06g03734 1054 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 60 300 - -
Car06g03734 1054 PANTHER BNAC08G43810D PROTEIN 400 1048 - -
Car06g03734 1054 PANTHER BNAC08G43810D PROTEIN 60 300 - -
Car06g03734 1054 Pfam Protein kinase domain 758 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g03734 1054 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Car06g03734 1054 MobiDBLite consensus disorder prediction 7 25 - -
Car06g03734 1054 SUPERFAMILY Protein kinase-like (PK-like) 736 1043 IPR011009 -
Car06g03734 1054 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03734 Car-Chr6 68996915 69005331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03734 773 1039 MAP Kinase Kinase Kinase AT1G63700 29.630 2.19e-21 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Car06g03734 Pkinase 9.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03734 - - gmx:100811118 1597.02